RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 HMMRO75330 724 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 IQSEC1Q6DN90 963 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 NECAB3Q96P71 396 aaPredicted RBP16.17■□□□□ 0.18
CDX2-202ENST00000548877 ACAD9Q9H845 621 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
CDX2-202ENST00000548877 MTMR4Q9NYA4 1195 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 SMPD1P17405 629 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 RABGGTBP53611 331 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 CCL23P55773 120 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 MORC4Q8TE76 937 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 TRPV6Q9H1D0 765 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 ZNF536O15090 1300 aa16.16■□□□□ 0.18
CDX2-202ENST00000548877 PLA2G6O60733 806 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 TTLL1O95922 423 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 BMP3P12645 472 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 MYOGP15173 224 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 ATP2A2P16615 1042 aaKnown RBP16.15■□□□□ 0.18
CDX2-202ENST00000548877 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 TFF2Q03403 129 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 TAPT1Q6NXT6 567 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 COG5Q9UP83 839 aa16.15■□□□□ 0.18
CDX2-202ENST00000548877 LCTP09848 1927 aa16.14■□□□□ 0.17
CDX2-202ENST00000548877 DYNC1LI2O43237 492 aaPredicted RBP16.14■□□□□ 0.17
CDX2-202ENST00000548877 KCNQ1P51787 676 aa16.14■□□□□ 0.17
CDX2-202ENST00000548877 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
CDX2-202ENST00000548877 PHOSPHO2Q8TCD6 241 aa16.14■□□□□ 0.17
CDX2-202ENST00000548877 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
CDX2-202ENST00000548877 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
CDX2-202ENST00000548877 SCN10AQ9Y5Y9 1956 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 SCN5AQ14524 2016 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 TLL1O43897 1013 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 SUPT20HL2P0C7V6 817 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 TTLL4Q14679 1199 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 SLFN13Q68D06 897 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
CDX2-202ENST00000548877 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
CDX2-202ENST00000548877 NEDD1Q8NHV4 660 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 GMCL1Q96IK5 515 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
CDX2-202ENST00000548877 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 MINDY4BA8MYZ0 360 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
CDX2-202ENST00000548877 MS4A1P11836 297 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 RFC2P35250 354 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 STAT2P52630 851 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
CDX2-202ENST00000548877 APPBP2Q92624 585 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 SCLYQ96I15 445 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 SLC9A7Q96T83 725 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 EPB41L4AQ9HCS5 686 aaPredicted RBP16.12■□□□□ 0.17
CDX2-202ENST00000548877 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
CDX2-202ENST00000548877 ZBBXA8MT70 800 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 TMEM232C9JQI7 657 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 CA3P07451 260 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 GNAT2P19087 354 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 PSMC6P62333 389 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 DUSP28Q4G0W2 176 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 LRRC47Q8N1G4 583 aaKnown RBP16.11■□□□□ 0.17
CDX2-202ENST00000548877 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 KBTBD3Q8NAB2 608 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 CYP39A1Q9NYL5 469 aa16.11■□□□□ 0.17
CDX2-202ENST00000548877 RBM47A0AV96 593 aaKnown RBP16.1■□□□□ 0.17
CDX2-202ENST00000548877 RFXAPO00287 272 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 PTGS1P23219 599 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 PURAQ00577 322 aaKnown RBP16.1■□□□□ 0.17
CDX2-202ENST00000548877 TAP1Q03518 808 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 TMEM63BQ5T3F8 832 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 DDX19BQ9UMR2 479 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 HCN4Q9Y3Q4 1203 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 TNKSO95271 1327 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 TANC1Q9C0D5 1861 aa16.1■□□□□ 0.17
CDX2-202ENST00000548877 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 EPOPA6NHQ4 379 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 GPAA1O43292 621 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 GPR37L1O60883 481 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 PRDM1O75626 825 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
CDX2-202ENST00000548877 ACTN1P12814 892 aa16.09■□□□□ 0.17
CDX2-202ENST00000548877 SKIV2LQ15477 1246 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms