RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 AGBL1Q96MI9 1066 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 KRT23Q9C075 422 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
GCN1-205ENST00000548821 A1CFQ9NQ94 594 aaKnown RBP11.32□□□□□ -0.6
GCN1-205ENST00000548821 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 MTMR10Q9NXD2 777 aa11.32□□□□□ -0.6
GCN1-205ENST00000548821 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
GCN1-205ENST00000548821 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
GCN1-205ENST00000548821 ARVCFO00192 962 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 NKRFO15226 690 aaKnown RBP eCLIP11.31□□□□□ -0.6
GCN1-205ENST00000548821 TIMP1P01033 207 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 SUPT20HL2P0C7V6 817 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 SDSP20132 328 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 CPT1AP50416 773 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 NUCB1Q02818 461 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 TRDNQ13061 729 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 RGS22Q8NE09 1264 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
GCN1-205ENST00000548821 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
GCN1-205ENST00000548821 KAT14Q9H8E8 782 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
GCN1-205ENST00000548821 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
GCN1-205ENST00000548821 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
GCN1-205ENST00000548821 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
GCN1-205ENST00000548821 FAM227BQ96M60 508 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
GCN1-205ENST00000548821 RLFQ13129 1914 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 TRIM43BA6NCK2 446 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 DYNC1LI2O43237 492 aaPredicted RBP11.29□□□□□ -0.6
GCN1-205ENST00000548821 CDK7P50613 346 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 CNTN2Q02246 1040 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 PDE4DQ08499 809 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 SHHQ15465 462 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
GCN1-205ENST00000548821 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
GCN1-205ENST00000548821 TLK2Q86UE8 772 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 TRIM43Q96BQ3 446 aaPredicted RBP11.29□□□□□ -0.6
GCN1-205ENST00000548821 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
GCN1-205ENST00000548821 UBAC1Q9BSL1 405 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 ZNF536O15090 1300 aa11.29□□□□□ -0.6
GCN1-205ENST00000548821 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 ERICH2A1L162 156 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 PDHBP11177 359 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
GCN1-205ENST00000548821 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
GCN1-205ENST00000548821 DUSP28Q4G0W2 176 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
GCN1-205ENST00000548821 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 MORC4Q8TE76 937 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
GCN1-205ENST00000548821 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
GCN1-205ENST00000548821 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 DLL1O00548 723 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 NMT2O60551 498 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 HAND2P61296 217 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 ITGA7Q13683 1181 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 IWS1Q96ST2 819 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 ZSCAN10Q96SZ4 725 aaPredicted RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 ABCB11O95342 1321 aa11.27□□□□□ -0.61
GCN1-205ENST00000548821 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.61
GCN1-205ENST00000548821 PFKMP08237 780 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
GCN1-205ENST00000548821 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 CALML3P27482 149 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 SLC16A2P36021 539 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
GCN1-205ENST00000548821 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
GCN1-205ENST00000548821 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 RAB30Q15771 203 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 Q7L0L9 218 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms