RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 PCDHA11Q9Y5I1 949 aa20.16■□□□□ 0.82
VDR-205ENST00000548664 SLC4A7Q9Y6M7 1214 aa20.16■□□□□ 0.82
VDR-205ENST00000548664 PLIN4Q96Q06 1357 aa20.16■□□□□ 0.82
VDR-205ENST00000548664 TANC1Q9C0D5 1861 aa20.16■□□□□ 0.82
VDR-205ENST00000548664 ASB14A6NK59 587 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 PRDM1O75626 825 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 TTLL1O95922 423 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 FDX1P10109 184 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 SMPD1P17405 629 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 TFF2Q03403 129 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 RNF146Q9NTX7 359 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 ZNF536O15090 1300 aa20.15■□□□□ 0.82
VDR-205ENST00000548664 TRANK1O15050 2925 aa20.14■□□□□ 0.82
VDR-205ENST00000548664 BMP3P12645 472 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 STAT2P52630 851 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 PSMC6P62333 389 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
VDR-205ENST00000548664 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 RPUSD2Q8IZ73 545 aaKnown RBP20.14■□□□□ 0.81
VDR-205ENST00000548664 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
VDR-205ENST00000548664 MICALL1Q8N3F8 863 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 OSBP2Q969R2 916 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 FAM122AQ96E09 287 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 AGBL1Q96MI9 1066 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 AP5M1Q9H0R1 490 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 COG6Q9Y2V7 657 aa20.14■□□□□ 0.81
VDR-205ENST00000548664 DDX49Q9Y6V7 483 aaKnown RBP20.14■□□□□ 0.81
VDR-205ENST00000548664 TMEM232C9JQI7 657 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 DYNC1LI2O43237 492 aaPredicted RBP20.13■□□□□ 0.81
VDR-205ENST00000548664 APPBP2Q92624 585 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 SCLYQ96I15 445 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 ZNF287Q9HBT7 754 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 BDP1A6H8Y1 2624 aa20.13■□□□□ 0.81
VDR-205ENST00000548664 PRRC2BQ5JSZ5 2229 aaKnown RBP20.12■□□□□ 0.81
VDR-205ENST00000548664 PTPRSQ13332 1948 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 ZEB2O60315 1214 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 MS4A1P11836 297 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
VDR-205ENST00000548664 TDO2P48775 406 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 KCNQ1P51787 676 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 TMEM63BQ5T3F8 832 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 FBXO16Q8IX29 292 aaPredicted RBP20.12■□□□□ 0.81
VDR-205ENST00000548664 KBTBD3Q8NAB2 608 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 C1QTNF1Q9BXJ1 281 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 Q9Y3F1 56 aa20.12■□□□□ 0.81
VDR-205ENST00000548664 COL4A4P53420 1690 aaPredicted RBP20.11■□□□□ 0.81
VDR-205ENST00000548664 ZBBXA8MT70 800 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 GPAA1O43292 621 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 AAK1Q2M2I8 961 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 TKFCQ3LXA3 575 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 IQSEC1Q6DN90 963 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 EEPD1Q7L9B9 569 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 NEDD1Q8NHV4 660 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
VDR-205ENST00000548664 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
VDR-205ENST00000548664 SCN10AQ9Y5Y9 1956 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 ERC2O15083 957 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 PFKMP08237 780 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 ALAS1P13196 640 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 POU3F3P20264 500 aaPredicted RBP20.1■□□□□ 0.81
VDR-205ENST00000548664 TTLL4Q14679 1199 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 FAM160B2Q86V87 743 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 CHURC1Q8WUH1 139 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 GMCL1Q96IK5 515 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 CYP39A1Q9NYL5 469 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 ISY1Q9ULR0 285 aaKnown RBP20.1■□□□□ 0.81
VDR-205ENST00000548664 MTCH2Q9Y6C9 303 aa20.1■□□□□ 0.81
VDR-205ENST00000548664 M0R2C6 588 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 RFXAPO00287 272 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
VDR-205ENST00000548664 CA3P07451 260 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 TSPY3P0CV98 308 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 TSPY8P0CW00 308 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 GNAT2P19087 354 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 SLC1A4P43007 532 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 MUM1L1Q5H9M0 696 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 STAG1Q8WVM7 1258 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 ECHDC1Q9NTX5 307 aa20.09■□□□□ 0.81
VDR-205ENST00000548664 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
VDR-205ENST00000548664 RNF113AO15541 343 aaKnown RBP20.08■□□□□ 0.81
VDR-205ENST00000548664 APPP05067 770 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 CYP2C9P11712 490 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.81
VDR-205ENST00000548664 SKIV2LQ15477 1246 aaKnown RBP20.08■□□□□ 0.81
VDR-205ENST00000548664 TMEM67Q5HYA8 995 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 IFNL3Q8IZI9 196 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 VTA1Q9NP79 307 aa20.08■□□□□ 0.81
VDR-205ENST00000548664 TNKSO95271 1327 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 EPOPA6NHQ4 379 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 PLA2G6O60733 806 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 MCCP23508 829 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 SNAP25P60880 206 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 DUSP28Q4G0W2 176 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 KIAA1211Q6ZU35 1233 aa20.07■□□□□ 0.8
VDR-205ENST00000548664 DEFB128Q7Z7B8 93 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms