RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ZCCHC17Q9NP64 241 aaKnown RBP19.75■□□□□ 0.75
KRT4-201ENST00000548097 RNF186Q9NXI6 227 aa19.75■□□□□ 0.75
KRT4-201ENST00000548097 THSD7BQ9C0I4 1608 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 NFIBO00712 420 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 CA12O43570 354 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 SYT1P21579 422 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 NCAPG2Q86XI2 1143 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 SMCO2A6NFE2 343 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 NLRP5P59047 1200 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 WDR78Q5VTH9 848 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 DNAJC5GQ8N7S2 189 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 GPRC5AQ8NFJ5 357 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 EFCC1Q9HA90 598 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 RNF146Q9NTX7 359 aa19.74■□□□□ 0.75
KRT4-201ENST00000548097 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
KRT4-201ENST00000548097 ATP2A1O14983 1001 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 ERCC3P19447 782 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 GCLCP48506 637 aaPredicted RBP19.73■□□□□ 0.75
KRT4-201ENST00000548097 OAZ1P54368 228 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 C17orf99Q6UX52 265 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 RASGRP4Q8TDF6 673 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 OXER1Q8TDS5 423 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 CLEC4DQ8WXI8 215 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 TSKSQ9UJT2 592 aa19.73■□□□□ 0.75
KRT4-201ENST00000548097 ALDH1A1P00352 501 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 BCRP11274 1271 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 TRIM29Q14134 588 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 NPY5RQ15761 445 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 UBE2SQ16763 222 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 USP17L6PQ6QN14 398 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 RIOX2Q8IUF8 465 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 REM2Q8IYK8 340 aaPredicted RBP19.72■□□□□ 0.75
KRT4-201ENST00000548097 FBXO18Q8NFZ0 1043 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 ABCB11O95342 1321 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 H3BQV1 296 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 CFBP00751 764 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 HOXA13P31271 388 aaPredicted RBP19.72■□□□□ 0.75
KRT4-201ENST00000548097 FAM110CQ1W6H9 321 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 IFFO2Q5TF58 517 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 MORF4L1Q9UBU8 362 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
KRT4-201ENST00000548097 MMP1P03956 469 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 XBP1P17861 261 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 NOM1Q5C9Z4 860 aaKnown RBP19.71■□□□□ 0.75
KRT4-201ENST00000548097 NSMFQ6X4W1 530 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 GTF3C2Q8WUA4 911 aaPredicted RBP19.71■□□□□ 0.75
KRT4-201ENST00000548097 PGBD1Q96JS3 809 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 PURBQ96QR8 312 aaKnown RBP19.71■□□□□ 0.75
KRT4-201ENST00000548097 PSTPIP2Q9H939 334 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 CWC22Q9HCG8 908 aaKnown RBP19.71■□□□□ 0.75
KRT4-201ENST00000548097 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
KRT4-201ENST00000548097 MRPL11Q9Y3B7 192 aaKnown RBP19.71■□□□□ 0.75
KRT4-201ENST00000548097 hCG_1984214I3L0E3 225 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 STX6O43752 255 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 NR5A1Q13285 461 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 FERMT3Q86UX7 667 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 ZNF713Q8N859 430 aaPredicted RBP19.7■□□□□ 0.74
KRT4-201ENST00000548097 ZMYND12Q9H0C1 365 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 SH3GLB2Q9NR46 395 aa19.7■□□□□ 0.74
KRT4-201ENST00000548097 BIN2Q9UBW5 565 aaPredicted RBP19.7■□□□□ 0.74
KRT4-201ENST00000548097 BTBD18B2RXH4 712 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 DDIT3P35638 169 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 ADCY7P51828 1080 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 SLC30A10Q6XR72 485 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 CCDC148Q8NFR7 591 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 MTMR6Q9Y217 621 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 ZSWIM8A7E2V4 1837 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 MEIS2O14770 477 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 JAKMIP3Q5VZ66 844 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
KRT4-201ENST00000548097 CCDC12Q8WUD4 166 aaPredicted RBP19.69■□□□□ 0.74
KRT4-201ENST00000548097 ACAD9Q9H845 621 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 C6orf50Q9HD87 102 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 RIC8AQ9NPQ8 531 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 PCDHA4Q9UN74 947 aa19.69■□□□□ 0.74
KRT4-201ENST00000548097 PDCP20941 246 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 CALML3P27482 149 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 CTGFP29279 349 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 EARS2Q5JPH6 523 aaKnown RBP19.68■□□□□ 0.74
KRT4-201ENST00000548097 PPP1R18Q6NYC8 613 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 CCAR1Q8IX12 1150 aaKnown RBP19.68■□□□□ 0.74
KRT4-201ENST00000548097 BLIDQ8IZY5 108 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 CUL5Q93034 780 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 ARHGAP39Q9C0H5 1083 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 A1CFQ9NQ94 594 aaKnown RBP19.68■□□□□ 0.74
KRT4-201ENST00000548097 ZDHHC9Q9Y397 364 aa19.68■□□□□ 0.74
KRT4-201ENST00000548097 FAM205CA6NFA0 338 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 SLC25A27O95847 323 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 CAP1Q01518 475 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 BAATQ14032 418 aaPredicted RBP19.67■□□□□ 0.74
KRT4-201ENST00000548097 FCHSD1Q86WN1 690 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 COL20A1Q9P218 1284 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 PGK2P07205 417 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 KRT2P35908 639 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 RPS6P62753 249 aaKnown RBP19.67■□□□□ 0.74
KRT4-201ENST00000548097 CCNA1P78396 465 aa19.67■□□□□ 0.74
KRT4-201ENST00000548097 RNF207Q6ZRF8 634 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms