RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 LOC285556D6RIA3 1793 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 UNCXA6NJT0 531 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 POTECB2RU33 542 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 TTLL12Q14166 644 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 ZNF174Q15697 407 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 USH1GQ495M9 461 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 NOM1Q5C9Z4 860 aaKnown RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 RESP18Q5W5W9 173 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 FBXO2Q9UK22 296 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-204ENST00000548068 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
RAB5B-204ENST00000548068 FAM237AA0A1B0GTK4 181 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 ZBED4O75132 1171 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 NR1I2O75469 434 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 FLOT1O75955 427 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 ICAM1P05362 532 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 GCFC2P16383 781 aaKnown RBP14.08□□□□□ -0.16
RAB5B-204ENST00000548068 MCM7P33993 719 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 PRPHP41219 470 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 HMGCS2P54868 508 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 PPATQ06203 517 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 PTGDRQ13258 359 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 TNMDQ9H2S6 317 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 GOLPH3LQ9H4A5 285 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 PPP1R9AQ9ULJ8 1098 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 MYPNQ86TC9 1320 aa14.08□□□□□ -0.16
RAB5B-204ENST00000548068 SYCE3A1L190 88 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 PIK3CDO00329 1044 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 PFKFB1P16118 471 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 SNAP25P60880 206 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 UBE2SQ16763 222 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 CCDC174Q6PII3 467 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 LDHDQ86WU2 507 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 FMR1NBQ8N0W7 255 aaPredicted RBP14.07□□□□□ -0.16
RAB5B-204ENST00000548068 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 ENGASEQ8NFI3 743 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 CCDC34Q96HJ3 373 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 PYM1Q9BRP8 204 aaKnown RBP14.07□□□□□ -0.16
RAB5B-204ENST00000548068 FBXO28Q9NVF7 368 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 TMEM260Q9NX78 707 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
RAB5B-204ENST00000548068 A0A1B0GVL5 298 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 NEMFO60524 1076 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 CCNT1O60563 726 aaKnown RBP14.06□□□□□ -0.16
RAB5B-204ENST00000548068 LONP1P36776 959 aaKnown RBP14.06□□□□□ -0.16
RAB5B-204ENST00000548068 SYKP43405 635 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 FKBP1BP68106 108 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 LETM2Q2VYF4 491 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 L1TD1Q5T7N2 865 aaKnown RBP14.06□□□□□ -0.16
RAB5B-204ENST00000548068 SHC4Q6S5L8 630 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
RAB5B-204ENST00000548068 TIGD1Q96MW7 591 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 ANO3Q9BYT9 981 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 HOOK1Q9UJC3 728 aaKnown RBP14.06□□□□□ -0.16
RAB5B-204ENST00000548068 CCPG1Q9ULG6 757 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 HPSEQ9Y251 543 aa14.06□□□□□ -0.16
RAB5B-204ENST00000548068 GCOM1H8Y6P7 765 aaPredicted RBP14.05□□□□□ -0.16
RAB5B-204ENST00000548068 CXCL11O14625 94 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 OR52Z1P0C646 297 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 POLR2MP0CAP2 368 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 TXLNAP40222 546 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 USP11P51784 963 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 NDUFA8P51970 172 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 OAZ1P54368 228 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 PPIL2Q13356 520 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
RAB5B-204ENST00000548068 PPP4R3AQ6IN85 833 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 MOXD1Q6UVY6 613 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 DTHD1Q6ZMT9 781 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
RAB5B-204ENST00000548068 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 ELP3Q9H9T3 547 aa14.05□□□□□ -0.16
RAB5B-204ENST00000548068 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms