RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC35G1Q2M3R5 365 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 QRICH1Q2TAL8 776 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 USH1GQ495M9 461 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 LHX8Q68G74 356 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 ZNF467Q7Z7K2 595 aaPredicted RBP21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 FAM133AQ8N9E0 248 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 CLEC4DQ8WXI8 215 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 MAMDC4Q6UXC1 1216 aa21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 MSL3Q8N5Y2 521 aaKnown RBP21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 MTMR8Q96EF0 704 aa21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 MAP3K14Q99558 947 aa21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 OGDHLQ9ULD0 1010 aa21.8■■□□□ 1.08
PRPF40B-206ENST00000547764 HMGB1P09429 215 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 BAATQ14032 418 aaPredicted RBP21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 UBE2Q1Q7Z7E8 422 aa21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 RIOX1Q9H6W3 641 aa21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 DDX20Q9UHI6 824 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 NRBP1Q9UHY1 535 aa21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 SYNGAP1Q96PV0 1343 aa21.79■■□□□ 1.08
PRPF40B-206ENST00000547764 SOWAHBA6NEL2 793 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 CYTH3O43739 400 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 FARP2O94887 1054 aaPredicted RBP21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 SNAI1O95863 264 aaPredicted RBP21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 CPA1P15085 419 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 SGMS1Q86VZ5 419 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 FBXO11Q86XK2 927 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 CNPY2Q9Y2B0 182 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 SLC12A7Q9Y666 1083 aa21.78■■□□□ 1.08
PRPF40B-206ENST00000547764 PTPDC1A2A3K4 754 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 ZBTB5O15062 677 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 SEPT4O43236 478 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 MSCO60682 206 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 ZNF865P0CJ78 1059 aaPredicted RBP21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 RXRAP19793 462 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 KIF5BP33176 963 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 RAB11FIP4Q86YS3 637 aa21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 PURBQ96QR8 312 aaKnown RBP21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 TNRC18O15417 2968 aaPredicted RBP21.77■■□□□ 1.08
PRPF40B-206ENST00000547764 ASTN1O14525 1302 aa21.77■■□□□ 1.07
PRPF40B-206ENST00000547764 ABCB11O95342 1321 aa21.77■■□□□ 1.07
PRPF40B-206ENST00000547764 BAZ2BQ9UIF8 2168 aaKnown RBP21.77■■□□□ 1.07
PRPF40B-206ENST00000547764 PPP1R11O60927 126 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 CALM1P0DP23 149 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 CALM2P0DP24 149 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 CALM3P0DP25 149 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 SLC30A10Q6XR72 485 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 RNF207Q6ZRF8 634 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 ARMCX2Q7L311 632 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 HOMER1Q86YM7 354 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 CCDC144CPQ8IYA2 1237 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 ANKLE1Q8NAG6 615 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 PIGSQ96S52 555 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 AMNQ9BXJ7 453 aa21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-206ENST00000547764 MYH6P13533 1939 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 CALML3P27482 149 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 MNX1P50219 401 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 RPS6P62753 249 aaKnown RBP21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 ANO1Q5XXA6 986 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 BLOC1S2Q6QNY1 142 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 DIS3LQ8TF46 1054 aaKnown RBP21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
PRPF40B-206ENST00000547764 ASB14A6NK59 587 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 PSMA5P28066 241 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 GNAQP50148 359 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 APOA5Q6Q788 366 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 FANCBQ8NB91 859 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 TBC1D5Q92609 795 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 PAWRQ96IZ0 340 aaKnown RBP21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 LZTS2Q9BRK4 669 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 SPZ1Q9BXG8 430 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 MRPL11Q9Y3B7 192 aaKnown RBP21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 DDX49Q9Y6V7 483 aaKnown RBP21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 MCM3APO60318 1980 aa21.74■■□□□ 1.07
PRPF40B-206ENST00000547764 PDE4DIPQ5VU43 2346 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 LCTP09848 1927 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 PNMA6FA0A0J9YX94 578 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 PLEKHA8P1O95397 391 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 CASTP20810 708 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 SMARCA1P28370 1054 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 FGD1P98174 961 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 ACVR2BQ13705 512 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 Q6ZUG5 572 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 SRBD1Q8N5C6 995 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 PIBF1Q8WXW3 757 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 ABHD16BQ9H3Z7 469 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 ADD3Q9UEY8 706 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 ZHX1Q9UKY1 873 aaPredicted RBP21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 PCDHA1Q9Y5I3 950 aa21.73■■□□□ 1.07
PRPF40B-206ENST00000547764 AKR1A1P14550 325 aa21.72■■□□□ 1.07
PRPF40B-206ENST00000547764 NECAB2Q7Z6G3 386 aa21.72■■□□□ 1.07
PRPF40B-206ENST00000547764 MCF2L2Q86YR7 1114 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms