RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 XRCC4Q13426 336 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 ELAC2Q9BQ52 826 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 IFNAR2P48551 515 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 KCNJ2P63252 427 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CREG2Q8IUH2 290 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 PLIN2Q99541 437 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 B4DLN1 442 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 AKR1B10O60218 316 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 SARSP49591 514 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 CORO1CQ9ULV4 474 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CCDC197Q8NCU1 140 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 MAGEC3Q8TD91 643 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 MAGOHBQ96A72 148 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 hCG_2014768A0A024R1R8 64 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 HMGB1P1B2RPK0 211 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 HAUS3Q68CZ6 603 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CWF19L1Q69YN2 538 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 SNX12Q9UMY4 172 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 TPP2P29144 1249 aaPredicted RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CNGA1P29973 690 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 NT5DC1Q5TFE4 455 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 ARHGAP22Q7Z5H3 698 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 IQCKQ8N0W5 287 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 NAPBQ9H115 298 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
RBFOX1-208ENST00000547372 OVOS2A0A0J9YW53 1432 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 OVOS2Q6IE36 1432 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 HOXB7P09629 217 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 MTIF2P46199 727 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 CCT8L1PA6NM43 557 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 FECHP22830 423 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 TRAPPC3O43617 180 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 SLC5A9Q2M3M2 681 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 WASF1Q92558 559 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
RBFOX1-208ENST00000547372 RFX7Q2KHR2 1363 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 AHCYL1O43865 530 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 FGAP02671 866 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 FERP16591 822 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 HOXC9P31274 260 aa13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 GLE1Q53GS7 698 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-208ENST00000547372 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms