RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 WDR78Q5VTH9 848 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 SLFN13Q68D06 897 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 UBE2Q1Q7Z7E8 422 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 CCAR1Q8IX12 1150 aaKnown RBP19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 NPLOC4Q8TAT6 608 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 SPATA32Q96LK8 384 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 DDX19AQ9NUU7 478 aaKnown RBP19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 STX8Q9UNK0 236 aa19.89■□□□□ 0.77
RBFOX1-207ENST00000547338 JAK2O60674 1132 aa19.88■□□□□ 0.77
RBFOX1-207ENST00000547338 PLS1Q14651 629 aa19.88■□□□□ 0.77
RBFOX1-207ENST00000547338 GMCL1Q96IK5 515 aa19.88■□□□□ 0.77
RBFOX1-207ENST00000547338 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
RBFOX1-207ENST00000547338 COBLO75128 1261 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 CDKL5O76039 1030 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 CTDNEP1O95476 244 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 ADORA2AP29274 412 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 CPLX2Q6PUV4 134 aaKnown RBP19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 MFSD6Q6ZSS7 791 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 U2AF1L4Q8WU68 220 aaKnown RBP19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 LRRC2Q9BYS8 371 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 KRT23Q9C075 422 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 TOMM22Q9NS69 142 aa19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 ZNFX1Q9P2E3 1918 aaKnown RBP19.87■□□□□ 0.77
RBFOX1-207ENST00000547338 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 BMP3P12645 472 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 PRKAR2AP13861 404 aaKnown RBP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 CACNB2Q08289 660 aaPredicted RBP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 PRPF38AQ8NAV1 312 aaKnown RBP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 TMEM47Q9BQJ4 181 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 MROH8Q9H579 483 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 RCOR1Q9UKL0 485 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 RIPK3Q9Y572 518 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 TCHHQ07283 1943 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 SGPL1O95470 568 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 STAT3P40763 770 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 NCAPG2Q86XI2 1143 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 TMTC2Q8N394 836 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 DEFB118Q96PH6 123 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 CRISPLD2Q9H0B8 497 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 RNF41Q9H4P4 317 aaPredicted RBP19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 SLC38A10Q9HBR0 1119 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 FEM1BQ9UK73 627 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 IVNS1ABPQ9Y6Y0 642 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 RPTORQ8N122 1335 aa19.86■□□□□ 0.77
RBFOX1-207ENST00000547338 TMEM232C9JQI7 657 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 CLCN1P35523 988 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 LIFRP42702 1097 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 RCAN1P53805 252 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 SGMS1Q86VZ5 419 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 KIFC2Q96AC6 838 aa19.85■□□□□ 0.77
RBFOX1-207ENST00000547338 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 ESPNB1AK53 854 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 STRNO43815 780 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 CAVIN2O95810 425 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 NT5C2P49902 561 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 ANTXR2P58335 489 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 PPP4R3BQ5MIZ7 849 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 TRMT44Q8IYL2 757 aaKnown RBP19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 ABRAQ8N0Z2 381 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 DDX11Q96FC9 970 aa19.84■□□□□ 0.77
RBFOX1-207ENST00000547338 B4E1Z4 1266 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 CPLX1O14810 134 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 KDM4AO75164 1064 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 SLC25A27O95847 323 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 CCDC192P0DO97 292 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 TOP1P11387 765 aaKnown RBP19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 CCND3P30281 292 aaPredicted RBP19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 SLC1A4P43007 532 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 MNX1P50219 401 aaPredicted RBP19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 CCT2P78371 535 aaKnown RBP19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 BRAPQ7Z569 592 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 TRPV1Q8NER1 839 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 ZKSCAN3Q9BRR0 538 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 ZNF536O15090 1300 aa19.83■□□□□ 0.77
RBFOX1-207ENST00000547338 CEP290O15078 2479 aa19.83■□□□□ 0.76
RBFOX1-207ENST00000547338 SH2B2O14492 632 aaPredicted RBP19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 PLA2G6O60733 806 aa19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 SNRNP48Q6IEG0 339 aaKnown RBP19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 ESR2Q92731 530 aa19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 FUCA2Q9BTY2 467 aa19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 RAVER2Q9HCJ3 691 aaKnown RBP19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 HMX1Q9NP08 348 aaPredicted RBP19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 PLXNA1Q9UIW2 1896 aa19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 FRMPD3Q5JV73 1810 aa19.82■□□□□ 0.76
RBFOX1-207ENST00000547338 GOLGA8BA8MQT2 603 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 CTAGE5O15320 804 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 CYP2C19P33261 490 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 STAT2P52630 851 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 SART3Q15020 963 aaKnown RBP19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 TTBK2Q6IQ55 1244 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
RBFOX1-207ENST00000547338 ZSWIM5Q9P217 1185 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms