RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SAMD3Q8N6K7 520 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 C22orf23Q9BZE7 217 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
DDX54-203ENST00000546869 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 UBXN2AP68543 259 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 RTN1Q16799 776 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
DDX54-203ENST00000546869 NPLOC4Q8TAT6 608 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 TRIB2Q92519 343 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 PIGSQ96S52 555 aa16.79■□□□□ 0.28
DDX54-203ENST00000546869 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
DDX54-203ENST00000546869 A1CFQ9NQ94 594 aaKnown RBP16.79■□□□□ 0.28
DDX54-203ENST00000546869 MAP3K20Q9NYL2 800 aaKnown RBP16.79■□□□□ 0.28
DDX54-203ENST00000546869 MRPL11Q9Y3B7 192 aaKnown RBP16.79■□□□□ 0.28
DDX54-203ENST00000546869 GOLGA8AA7E2F4 631 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 PLEKHA8P1O95397 391 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 ELNP15502 786 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 CAPN2P17655 700 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 RXRAP19793 462 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
DDX54-203ENST00000546869 METAP2P50579 478 aaKnown RBP eCLIP16.78■□□□□ 0.28
DDX54-203ENST00000546869 GHRHRQ02643 423 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 FUT2Q10981 343 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 MAP3K21Q5TCX8 1036 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
DDX54-203ENST00000546869 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 BACH2Q9BYV9 841 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 HOMER2Q9NSB8 354 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
DDX54-203ENST00000546869 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.28
DDX54-203ENST00000546869 PGK2P07205 417 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
DDX54-203ENST00000546869 CCL14Q16627 93 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 CCDC144CPQ8IYA2 1237 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 KIF2CQ99661 725 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 FLRT1Q9NZU1 646 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
DDX54-203ENST00000546869 RPTORQ8N122 1335 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 NFIBO00712 420 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 INHAP05111 366 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 CDC27P30260 824 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 NEK4P51957 841 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 MFSD14CQ5VZR4 134 aa16.76■□□□□ 0.27
DDX54-203ENST00000546869 BIN2Q9UBW5 565 aaPredicted RBP16.76■□□□□ 0.27
DDX54-203ENST00000546869 SEC63Q9UGP8 760 aaKnown RBP16.76■□□□□ 0.27
DDX54-203ENST00000546869 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
DDX54-203ENST00000546869 USH1GQ495M9 461 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 NSMFQ6X4W1 530 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 RNF207Q6ZRF8 634 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 RAB11FIP4Q86YS3 637 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 CMTR1Q8N1G2 835 aaKnown RBP16.75■□□□□ 0.27
DDX54-203ENST00000546869 TINF2Q9BSI4 451 aa16.75■□□□□ 0.27
DDX54-203ENST00000546869 hCG_1984214I3L0E3 225 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 IFNAR1P17181 557 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 AK2P54819 239 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
DDX54-203ENST00000546869 BAATQ14032 418 aaPredicted RBP16.74■□□□□ 0.27
DDX54-203ENST00000546869 NTRK3Q16288 839 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 ZNF713Q8N859 430 aaPredicted RBP16.74■□□□□ 0.27
DDX54-203ENST00000546869 DNERQ8NFT8 737 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 FGD4Q96M96 766 aa16.74■□□□□ 0.27
DDX54-203ENST00000546869 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
DDX54-203ENST00000546869 CNTNAP5Q8WYK1 1306 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 SOWAHBA6NEL2 793 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 ASB14A6NK59 587 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 OPLAHO14841 1288 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 PRPF3O43395 683 aaKnown RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 CCL5P13501 91 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 HSD17B4P51659 736 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 CNTN2Q02246 1040 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 MORC4Q8TE76 937 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 TMEM106CQ9BVX2 250 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 HMX1Q9NP08 348 aaPredicted RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 PAK6Q9NQU5 681 aaPredicted RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 ADD3Q9UEY8 706 aaKnown RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
DDX54-203ENST00000546869 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
DDX54-203ENST00000546869 PTPDC1A2A3K4 754 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms