RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CABP7Q86V35 215 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 NLRP7Q8WX94 980 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 HAUS1Q96CS2 278 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 MAK16Q9BXY0 300 aaKnown RBP14.02□□□□□ -0.16
PTCH1-212ENST00000546744 RESTQ13127 1097 aa14.02□□□□□ -0.17
PTCH1-212ENST00000546744 KCTD16Q68DU8 428 aa14.02□□□□□ -0.17
PTCH1-212ENST00000546744 PPP1R2P3Q6NXS1 205 aa14.02□□□□□ -0.17
PTCH1-212ENST00000546744 PIK3AP1Q6ZUJ8 805 aa14.02□□□□□ -0.17
PTCH1-212ENST00000546744 STAMBPL1Q96FJ0 436 aa14.02□□□□□ -0.17
PTCH1-212ENST00000546744 THAP12O43422 761 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 HNRNPCL1O60812 293 aaKnown RBP14.01□□□□□ -0.17
PTCH1-212ENST00000546744 TNNI2P48788 182 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 ANKRD20A4Q4UJ75 823 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 ANKRD20A8PQ5CZ79 823 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 COG1Q8WTW3 980 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 HNRNPLLQ8WVV9 542 aaKnown RBP14.01□□□□□ -0.17
PTCH1-212ENST00000546744 IWS1Q96ST2 819 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-212ENST00000546744 MGEA5O60502 916 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 SLFN14P0C7P3 912 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTCH1-212ENST00000546744 MYOCDQ8IZQ8 938 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 LRRC59Q96AG4 307 aaKnown RBP14.01□□□□□ -0.17
PTCH1-212ENST00000546744 RILPQ96NA2 401 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 DBNDD2Q9BQY9 259 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 KLC4Q9NSK0 619 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 SCINQ9Y6U3 715 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 PARP9Q8IXQ6 854 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 RWDD2AQ9UIY3 292 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 TACC3Q9Y6A5 838 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 GMNCA6NCL1 334 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 MFAP3LO75121 409 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 MRFAP1Q9Y605 127 aa14.01□□□□□ -0.17
PTCH1-212ENST00000546744 STK10O94804 968 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 POLE2P56282 527 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 NR1H3Q13133 447 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 NSUN7Q8NE18 718 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 V9GY48 417 aaPredicted RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 MAPK13O15264 365 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 XRCC5P13010 732 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 PDIA3P30101 505 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 CORO7P57737 925 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 PTH1RQ03431 593 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 PLCB4Q15147 1175 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 UAP1Q16222 522 aaPredicted RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 GSDMBQ8TAX9 411 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 AK8Q96MA6 479 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 HAUS8Q9BT25 410 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 EIF2AQ9BY44 585 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 ARHGAP42A6NI28 874 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 ZWINTO95229 277 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 RPN1P04843 607 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 LMNB1P20700 586 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 RBL2Q08999 1139 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 HERC4Q5GLZ8 1057 aaPredicted RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
PTCH1-212ENST00000546744 GRAMD1AQ96CP6 724 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 KRT12Q99456 494 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 THAP9Q9H5L6 903 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 SUFUQ9UMX1 484 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 MAPK8IP1Q9UQF2 711 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 CARMIL3Q8ND23 1372 aa14□□□□□ -0.17
PTCH1-212ENST00000546744 CHGBP05060 677 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
PTCH1-212ENST00000546744 PLBD2Q8NHP8 589 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 PIP4K2CQ8TBX8 421 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 MBD4O95243 580 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 MAGEB6Q8N7X4 407 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 C3orf20Q8ND61 904 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 EFHD1Q9BUP0 239 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 USP44Q9H0E7 712 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 GPR108Q9NPR9 543 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
PTCH1-212ENST00000546744 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 TEX9Q8N6V9 391 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 HAUS7Q99871 368 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 VPS37BQ9H9H4 285 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 ANKIB1Q9P2G1 1089 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 ARMCX3Q9UH62 379 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-212ENST00000546744 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 BAG2O95816 211 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 GJC1P36383 396 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
PTCH1-212ENST00000546744 MAN2A1Q16706 1144 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 OGFOD1Q8N543 542 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 SNX29Q8TEQ0 813 aa13.99□□□□□ -0.17
PTCH1-212ENST00000546744 PDE1CQ14123 709 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-212ENST00000546744 NBPF20Q3BBV1 942 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms