RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 CTAGE1Q96RT6 745 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 UBA5Q9GZZ9 404 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 GLI3P10071 1580 aa16.37■□□□□ 0.21
HOXC11-202ENST00000546378 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 EIF4E1BA6NMX2 242 aaKnown RBP16.36■□□□□ 0.21
HOXC11-202ENST00000546378 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 CAPN7Q9Y6W3 813 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 CHRNDQ07001 517 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 GBP3Q9H0R5 595 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
HOXC11-202ENST00000546378 KRT86O43790 486 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 IVLP07476 585 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 KLRK1P26718 216 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 TRADDQ15628 312 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 KIRREL3Q8IZU9 778 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
HOXC11-202ENST00000546378 PANX2Q96RD6 677 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
HOXC11-202ENST00000546378 MTRQ99707 1265 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 TUBGCP2Q9BSJ2 902 aa16.36■□□□□ 0.21
HOXC11-202ENST00000546378 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.36■□□□□ 0.21
HOXC11-202ENST00000546378 TULP2O00295 520 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 EBAG9O00559 213 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 SEC24CP53992 1094 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 GUCY1A3Q02108 690 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 TMEM60Q9H2L4 133 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 ARFGEF2Q9Y6D5 1785 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 CCNT1O60563 726 aaKnown RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 NOP2P46087 812 aaKnown RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 PRPF4BQ13523 1007 aaKnown RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 NFIXQ14938 502 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 TXNRD1Q16881 649 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 OR2W6PQ8NHA6 318 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 LPIN2Q92539 896 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 ARL8AQ96BM9 186 aa16.35■□□□□ 0.21
HOXC11-202ENST00000546378 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 REXO2Q9Y3B8 237 aaKnown RBP16.35■□□□□ 0.21
HOXC11-202ENST00000546378 RXRBP28702 533 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
HOXC11-202ENST00000546378 CAPN6Q9Y6Q1 641 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 TMCO5BA8MYB1 307 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 MYO1FO00160 1098 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 NFU1Q9UMS0 254 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 PSMA7O14818 248 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 ERLIN2O94905 339 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 GUCY2DQ02846 1103 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 UBE3CQ15386 1083 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 NBPF9Q3BBW0 867 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 CDK5RAP3Q96JB5 506 aa16.34■□□□□ 0.21
HOXC11-202ENST00000546378 SEPT11Q9NVA2 429 aaKnown RBP16.34■□□□□ 0.21
HOXC11-202ENST00000546378 GFPT1Q06210 699 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-202ENST00000546378 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
HOXC11-202ENST00000546378 EXOC1Q9NV70 894 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-202ENST00000546378 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-202ENST00000546378 KIAA0754O94854 1291 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 CLSTN1O94985 981 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 TUBB4AP04350 444 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-202ENST00000546378 HERVK_113P62684 666 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 FAM71BQ8TC56 605 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
HOXC11-202ENST00000546378 PRDX5P30044 214 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 CLEC10AQ8IUN9 316 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 MAP2K7O14733 419 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 TFAP4Q01664 338 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 ACTN3Q08043 901 aaPredicted RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 IL17AQ16552 155 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 JPH2Q9BR39 696 aaPredicted RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 RNF41Q9H4P4 317 aaPredicted RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 HPCAL4Q9UM19 191 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 UQCRFS1P1P0C7P4 283 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 EHHADHQ08426 723 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 STK4Q13043 487 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms