RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 HDAC6Q9UBN7 1215 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 PHF24Q9UPV7 400 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 GOLGA6L10A6NI86 522 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 FANCGO15287 622 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 MGRN1O60291 552 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 VDRP11473 427 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 GSDMDP57764 484 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 ST3GAL1Q11201 340 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 MKRN4PQ13434 485 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 BTG3Q14201 252 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 RBM43Q6ZSC3 357 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 DZIP1Q86YF9 867 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 TBC1D10CQ8IV04 446 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 CCDC102AQ96A19 550 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 STRBPQ96SI9 672 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 MTRQ99707 1265 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 OSBPL5Q9H0X9 879 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 RETREG1Q9H6L5 497 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 COL5A3P25940 1745 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 NHSQ6T4R5 1651 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 B4DLN1 442 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 BIN1O00499 593 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 PRC1O43663 620 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 KRT38O76015 456 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 CEBPZQ03701 1054 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 RBM26Q5T8P6 1007 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 B4GALNT4Q76KP1 1039 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 IFNL3Q8IZI9 196 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 NLGN1Q8N2Q7 840 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 MSANTD4Q8NCY6 345 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 CCDC47Q96A33 483 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 DSCC1Q9BVC3 393 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 ANKRD2Q9GZV1 360 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 BRD8Q9H0E9 1235 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 IRF2BPLQ9H1B7 796 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 EPB41L4AQ9HCS5 686 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 SLC40A1Q9NP59 571 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 PNPLA7Q6ZV29 1317 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 POTEB2H3BUK9 544 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 FIBPO43427 364 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 ZBTB7AO95365 584 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 MECOMQ03112 1051 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 DRP2Q13474 957 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 KRT32Q14532 448 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 CLPPQ16740 277 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 DHX32Q7L7V1 743 aaKnown RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 TMC6Q7Z403 805 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 CEP57Q86XR8 500 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 CCDC150Q8NCX0 1101 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 YIPF3Q9GZM5 350 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 VIPAS39Q9H9C1 493 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 STK32BQ9NY57 414 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 POLLQ9UGP5 575 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 ATF5Q9Y2D1 282 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 TCRBV5S4A2TA0A5A2 114 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GOLGA6L19H0YKK7 550 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 CYP2D6P10635 497 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 PDHBP11177 359 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GNAT1P11488 350 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 YY1P25490 414 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 IRAK1P51617 712 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GTF2IP78347 998 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 UBE3CQ15386 1083 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 APLFQ8IW19 511 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 CMTR1Q8N1G2 835 aaKnown RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GOLGA1Q92805 767 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 JAKMIP2Q96AA8 810 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 AKT1S1Q96B36 256 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 ZWILCHQ9H900 591 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GJB4Q9NTQ9 266 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
NECAP1-208ENST00000545807 GRIN2DO15399 1336 aa7.44□□□□□ -1.22
NECAP1-208ENST00000545807 AKAP11Q9UKA4 1901 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 KLF18A0A0U1RQI7 1052 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 GSG1L2A8MUP6 293 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 PLSCR1O15162 318 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 RNF40O75150 1001 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 VIL1P09327 827 aaKnown RBP7.43□□□□□ -1.22
NECAP1-208ENST00000545807 XBP1P17861 261 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 BLMHQ13867 455 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 KIAA0753Q2KHM9 967 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 MICU3Q86XE3 530 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 C2CD5Q86YS7 1000 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 ZNF384Q8TF68 577 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 SPAG5Q96R06 1193 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 CORO1BQ9BR76 489 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 TM6SF1Q9BZW5 370 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 DBNDD1Q9H9R9 158 aa7.43□□□□□ -1.22
NECAP1-208ENST00000545807 KCNQ5Q9NR82 932 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms