RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 LARSQ9P2J5 1176 aaKnown RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 ABCD1P33897 745 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RASSF2P50749 326 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 PDE6CP51160 858 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 TCP10Q12799 353 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 CEP85LQ5SZL2 805 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 FRMPD2Q68DX3 1309 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 NOL3O60936 208 aaKnown RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 NSMFQ6X4W1 530 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 PSMD2Q13200 908 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 SH3GLB2Q9NR46 395 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 ODF2LQ9ULJ1 636 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 CASP14P31944 242 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 ICA1Q05084 483 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 ZSCAN26Q16670 478 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 PSMB7Q99436 277 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 C1orf112Q9NSG2 853 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 RCAN1P53805 252 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 TSNAXIP1Q2TAA8 658 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 VSIG1Q86XK7 387 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 VSTM4Q8IW00 320 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 H7C1W4 665 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 K7ENM7 598 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 CYP2J2P51589 502 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC117Q8IWD4 279 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-209ENST00000545689 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
COL4A6-209ENST00000545689 DAPK3O43293 454 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 DTNBO60941 627 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 TNNI1P19237 187 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 MAN2A1Q16706 1144 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 C10orf76Q5T2E6 689 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 ARL6IP4Q66PJ3 421 aaKnown RBP13.74□□□□□ -0.21
COL4A6-209ENST00000545689 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 USP21Q9UK80 565 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 SLC39A2Q9NP94 309 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 GMNNO75496 209 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 PPP1R21Q6ZMI0 780 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 SASH1O94885 1247 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 PSMC4P43686 418 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 TRIM11Q96F44 468 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 KRT15P19012 456 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 BPIFB4P59827 614 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
COL4A6-209ENST00000545689 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 CFAP57Q96MR6 1250 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
COL4A6-209ENST00000545689 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 GNGT1P63211 74 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 PLA2G4DQ86XP0 818 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 OSBP2Q969R2 916 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 CAPS2Q9BXY5 557 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 PPIP5K2O43314 1243 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 TTLL1O95922 423 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 ARHGEF16Q5VV41 709 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 BUB1BO60566 1050 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 BPIFA3Q9BQP9 254 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 CD19P15391 556 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 RBL2Q08999 1139 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 GKAP1Q5VSY0 366 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
COL4A6-209ENST00000545689 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.212e-8■■■■■ 38.3
COL4A6-209ENST00000545689 SARNPP82979 210 aaKnown RBP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms