RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 SNX17Q15036 470 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 LRRC41Q15345 812 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SHHQ15465 462 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 FAM47AQ5JRC9 791 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 C9orf50Q5SZB4 431 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 ZNF697Q5TEC3 545 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 NCAPG2Q86XI2 1143 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 CLEC10AQ8IUN9 316 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SIAH1Q8IUQ4 282 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 ABRAQ8N0Z2 381 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SPICE1Q8N0Z3 855 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 CLASRPQ8N2M8 674 aaKnown RBP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 PANK1Q8TE04 598 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 BADQ92934 168 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 FERMT2Q96AC1 680 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 ATG4CQ96DT6 458 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 DYNLL2Q96FJ2 89 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 MAML3Q96JK9 1138 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 CCDC17Q96LX7 622 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 COL25A1Q9BXS0 654 aaPredicted RBP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SH2D4AQ9H788 454 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 VCPKMTQ9H867 229 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 ARMT1Q9H993 441 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 ARHGEF10LQ9HCE6 1279 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 PRDM9Q9NQV7 894 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 PRDM5Q9NQX1 630 aaPredicted RBP4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 SWAP70Q9UH65 585 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 TMX2Q9Y320 296 aa4.38□□□□□ -1.71
LPCAT3-212ENST00000545459 MYH8P13535 1937 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 LAMA3Q16787 3333 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 CYP2D7A0A087X1C5 515 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TRIM43BA6NCK2 446 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 USP17L12C9JPN9 530 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 USP17L21D6R901 530 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 WDR46O15213 610 aaKnown RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 MBD4O95243 580 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SLC25A27O95847 323 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 PGK2P07205 417 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 IFIT2P09913 472 aaKnown RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 FBXO45P0C2W1 286 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 RARBP10826 455 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 EEF2P13639 858 aaKnown RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 CDK8P49336 464 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SMAD3P84022 425 aaKnown RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 HNRNPUQ00839 825 aaKnown RBP eCLIP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TLE2Q04725 743 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 KCTD2Q14681 263 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TMEM132BQ14DG7 1078 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SLFNL1Q499Z3 407 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 C12orf60Q5U649 245 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 C1orf53Q5VUE5 145 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SH3RF1Q7Z6J0 888 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 RIOX2Q8IUF8 465 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SPNS2Q8IVW8 549 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 RPAP2Q8IXW5 612 aaPredicted RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 AMOTL1Q8IY63 956 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TRIM43Q96BQ3 446 aaPredicted RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 MMP19Q99542 508 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 CDX2Q99626 313 aaPredicted RBP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TINF2Q9BSI4 451 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 BCL11AQ9H165 835 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 SEMA6BQ9H3T3 888 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 KANSL2Q9H9L4 492 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 XPNPEP3Q9NQH7 507 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 PDLIM7Q9NR12 457 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 ATP8A2Q9NTI2 1148 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 FBXO28Q9NVF7 368 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 PAG1Q9NWQ8 432 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 NRBP1Q9UHY1 535 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 ADAMTS5Q9UNA0 930 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 PHF24Q9UPV7 400 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 TACC3Q9Y6A5 838 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 PARP14Q460N5 1801 aa4.37□□□□□ -1.71
LPCAT3-212ENST00000545459 ZNFX1Q9P2E3 1918 aaKnown RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 BAZ2AQ9UIF9 1905 aaKnown RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 A0A1W2PQ45 241 aaPredicted RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 A0A1W2PQY0 241 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 SMIM22K7EJ46 135 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 VWA5AO00534 786 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 KIAA0355O15063 1070 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 ZBTB24O43167 697 aaPredicted RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 RAB11FIP3O75154 756 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 HMMRO75330 724 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 S1PR4O95977 384 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 PGK1P00558 417 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 CHGBP05060 677 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 CLTBP09497 229 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 ZNF865P0CJ78 1059 aaPredicted RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 AKR1A1P14550 325 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 RAG1P15918 1043 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 TAL1P17542 331 aaPredicted RBP4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 ATP5JP18859 108 aa4.36□□□□□ -1.71
LPCAT3-212ENST00000545459 ITGB8P26012 769 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms