RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
DDX11-228ENST00000545115 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
DDX11-228ENST00000545115 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 FGAP02671 866 aa16.67■□□□□ 0.26
DDX11-228ENST00000545115 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
DDX11-228ENST00000545115 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
DDX11-228ENST00000545115 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX11-228ENST00000545115 FAM126BQ8IXS8 530 aa16.67■□□□□ 0.26
DDX11-228ENST00000545115 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
DDX11-228ENST00000545115 ASTN1O14525 1302 aa16.67■□□□□ 0.26
DDX11-228ENST00000545115 LRRC37A2A6NM11 1700 aa16.66■□□□□ 0.26
DDX11-228ENST00000545115 TLR3O15455 904 aaKnown RBP16.66■□□□□ 0.26
DDX11-228ENST00000545115 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
DDX11-228ENST00000545115 TOP1P11387 765 aaKnown RBP16.66■□□□□ 0.26
DDX11-228ENST00000545115 BEX3Q00994 111 aa16.66■□□□□ 0.26
DDX11-228ENST00000545115 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■■■□ 22.6
DDX11-228ENST00000545115 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
DDX11-228ENST00000545115 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
DDX11-228ENST00000545115 RANBP17Q9H2T7 1088 aaKnown RBP16.66■□□□□ 0.26
DDX11-228ENST00000545115 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
DDX11-228ENST00000545115 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.65■□□□□ 0.26
DDX11-228ENST00000545115 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.65■□□□□ 0.26
DDX11-228ENST00000545115 CABYRO75952 493 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 SLC16A2P36021 539 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 SYDE2Q5VT97 1194 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 ZNF589Q86UQ0 364 aaPredicted RBP16.65■□□□□ 0.26
DDX11-228ENST00000545115 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
DDX11-228ENST00000545115 TMEM199Q8N511 208 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 TMEM47Q9BQJ4 181 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■■ 35.2
DDX11-228ENST00000545115 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
DDX11-228ENST00000545115 TRIM6-TRIM34B2RNG4 842 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 ZEB2O60315 1214 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 SMPD1P17405 629 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 AAMPQ13685 434 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 FSCN1Q16658 493 aaKnown RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 CXCL17Q6UXB2 119 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 EEPD1Q7L9B9 569 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 MAFAQ8NHW3 353 aaPredicted RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 MORC4Q8TE76 937 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 PDGFCQ9NRA1 345 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 Q9Y3F1 56 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
DDX11-228ENST00000545115 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
DDX11-228ENST00000545115 DYNC1LI2O43237 492 aaPredicted RBP16.63■□□□□ 0.25
DDX11-228ENST00000545115 CD4P01730 458 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 PDHBP11177 359 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
DDX11-228ENST00000545115 FOSL2P15408 326 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 CSF2RAP15509 400 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 DNAJB2P25686 324 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 HAND2P61296 217 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 MFSD6Q6ZSS7 791 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 SLC43A3Q8NBI5 491 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 RILPL2Q969X0 211 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 CDH23Q9H251 3354 aa16.63■□□□□ 0.25
DDX11-228ENST00000545115 A0A0C4DFX4 3053 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 NFIBO00712 420 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 PTGS1P23219 599 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 ITGA7Q13683 1181 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 PSRC1Q6PGN9 363 aaPredicted RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 TTC14Q96N46 770 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 PURBQ96QR8 312 aaKnown RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
DDX11-228ENST00000545115 GPCPD1Q9NPB8 672 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 LCTP09848 1927 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 UNC80Q8N2C7 3258 aa16.62■□□□□ 0.25
DDX11-228ENST00000545115 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
DDX11-228ENST00000545115 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 RASIP1Q5U651 963 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 SMC5Q8IY18 1101 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 COL25A1Q9BXS0 654 aaPredicted RBP16.61■□□□□ 0.25
DDX11-228ENST00000545115 HIPK3Q9H422 1215 aa16.61■□□□□ 0.25
DDX11-228ENST00000545115 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms