RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 CACNA2D3Q8IZS8 1091 aa9.92□□□□□ -0.82
NECAP1-207ENST00000544891 VPS52Q8N1B4 723 aa9.92□□□□□ -0.82
NECAP1-207ENST00000544891 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
NECAP1-207ENST00000544891 NRBP2Q9NSY0 501 aa9.92□□□□□ -0.82
NECAP1-207ENST00000544891 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
NECAP1-207ENST00000544891 COL22A1Q8NFW1 1626 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-207ENST00000544891 COL14A1Q05707 1796 aaKnown RBP9.92□□□□□ -0.82
NECAP1-207ENST00000544891 LOC102724428A0A0B4J2F2 783 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 NDUFAB1O14561 156 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 PRPF6O94906 941 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 HARSP12081 509 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 SIK1P57059 783 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 CERKLQ49MI3 558 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 CARD6Q9BX69 1037 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 DHX36Q9H2U1 1008 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 RIC8AQ9NPQ8 531 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 ZNF277Q9NRM2 450 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 TYW1Q9NV66 732 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 JAK2O60674 1132 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 FGAP02671 866 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 EEF1GP26641 437 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 RASSF2P50749 326 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 GPBP1Q86WP2 473 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 DHTKD1Q96HY7 919 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 WDR11Q9BZH6 1224 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 TRPC5Q9UL62 973 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 KCNJ14Q9UNX9 436 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 JAG2Q9Y219 1238 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 ZNF804BA4D1E1 1349 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 ERBB3P21860 1342 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 VIMP08670 466 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 TMOD1P28289 359 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 CA8P35219 290 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 CPXCR1Q8N123 301 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 ADCY9O60503 1353 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 WDR17Q8IZU2 1322 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 KCNJ18B7U540 433 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 ATP2C2O75185 946 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 H2AFZP0C0S5 128 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 PSMC4P43686 418 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 KCNJ12Q14500 433 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 SLC39A14Q15043 492 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 DNAJC21Q5F1R6 531 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 H2AFVQ71UI9 128 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 RSRC1Q96IZ7 334 aaKnown RBP9.91□□□□□ -0.82
NECAP1-207ENST00000544891 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 C1orf112Q9NSG2 853 aa9.91□□□□□ -0.82
NECAP1-207ENST00000544891 A0A0D9SFI3 127 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 EIF3CLB5ME19 914 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 IKBKBO14920 756 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 TNNC2P02585 160 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 LMNB2Q03252 620 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 ICA1Q05084 483 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 OTUD7BQ6GQQ9 843 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 DPY19L2Q6NUT2 758 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 EIF3CQ99613 913 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 CD2APQ9Y5K6 639 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 THAP12O43422 761 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 PHBP35232 272 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 USP14P54578 494 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 ETF1P62495 437 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 ATP11AP98196 1134 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 MORC3Q14149 939 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 FAM160B1Q5W0V3 765 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 DYMQ7RTS9 669 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 CCDC105Q8IYK2 499 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 ATP6V0A1Q93050 837 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 USP28Q96RU2 1077 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 RNF14Q9UBS8 474 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 I3L4J1 428 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 CCNA1P78396 465 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 CHRNDQ07001 517 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 MAP3K21Q5TCX8 1036 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 HHATQ5VTY9 493 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 GLG1Q92896 1179 aa9.9□□□□□ -0.82
NECAP1-207ENST00000544891 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.82
NECAP1-207ENST00000544891 PFDN6O15212 129 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 RNF40O75150 1001 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 NR1I2O75469 434 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 GSPT1P15170 499 aaKnown RBP9.9□□□□□ -0.83
NECAP1-207ENST00000544891 TNNI1P19237 187 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 CDC25BP30305 580 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 TTC31Q49AM3 519 aaPredicted RBP9.9□□□□□ -0.83
NECAP1-207ENST00000544891 FAM173BQ6P4H8 233 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.83
NECAP1-207ENST00000544891 KANSL2Q9H9L4 492 aa9.9□□□□□ -0.83
NECAP1-207ENST00000544891 BIN2Q9UBW5 565 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms