RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 SEPT6Q14141 434 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 DDR2Q16832 855 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 GK5Q6ZS86 529 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 TTLL7Q6ZT98 887 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 CTU1Q7Z7A3 348 aaKnown RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 REXO1Q8N1G1 1221 aaKnown RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 MICALL1Q8N3F8 863 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 CELF2-AS1Q8N7Q2 184 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 FAM169BQ8N8A8 192 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 SH3TC2Q8TF17 1288 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 GCC1Q96CN9 775 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 GMCL1Q96IK5 515 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 POP1Q99575 1024 aaKnown RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 UBE2OQ9C0C9 1292 aaKnown RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 CBX8Q9HC52 389 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 GBA2Q9HCG7 927 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-222ENST00000544585 BRMS1Q9HCU9 246 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 ST7Q9NRC1 585 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 CACNA1SQ13698 1873 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 RIC1Q4ADV7 1423 aa7.85□□□□□ -1.15
CPSF7-222ENST00000544585 SCN7AQ01118 1682 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-222ENST00000544585 PPP1R12AO14974 1030 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-222ENST00000544585 CILPO75339 1184 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 CDC45O75419 566 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 NTSR2O95665 410 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 BMP6P22004 513 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 FGFR3P22607 806 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 RPS12P25398 132 aaKnown RBP7.84□□□□□ -1.15
CPSF7-222ENST00000544585 SOX10P56693 466 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 PCDH1Q08174 1060 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 DCTN1Q14203 1278 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 PKDCCQ504Y2 493 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 PLEKHG4Q58EX7 1191 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 LLGL2Q6P1M3 1020 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 DDX46Q7L014 1031 aaKnown RBP7.84□□□□□ -1.15
CPSF7-222ENST00000544585 KRT26Q7Z3Y9 468 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 REC114Q7Z4M0 266 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 SULF2Q8IWU5 870 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 DNAJC7Q99615 494 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 BRINP2Q9C0B6 783 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 MIS18AQ9NYP9 233 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
CPSF7-222ENST00000544585 MSRB2Q9Y3D2 182 aa7.84□□□□□ -1.15
CPSF7-222ENST00000544585 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 PDPK1O15530 556 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 B3GALT4O96024 378 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 MYL6BP14649 208 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 EIF4A1P60842 406 aaKnown RBP7.83□□□□□ -1.16
CPSF7-222ENST00000544585 FXNQ16595 210 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 HSP90AB3PQ58FF7 597 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 LARP1BQ659C4 914 aaKnown RBP7.83□□□□□ -1.16
CPSF7-222ENST00000544585 CCDC155Q8N6L0 562 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 APPBP2Q92624 585 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 PLD4Q96BZ4 506 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 PCGF6Q9BYE7 350 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 DNAJB12Q9NXW2 375 aaKnown RBP7.83□□□□□ -1.16
CPSF7-222ENST00000544585 MAPK8IP1Q9UQF2 711 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 ABCC12Q96J65 1359 aa7.83□□□□□ -1.16
CPSF7-222ENST00000544585 ABCC4O15439 1325 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 UBN2Q6ZU65 1347 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 DNAJC6O75061 913 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 DGAT1O75907 488 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 PTPRAP18433 802 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 ARNTP27540 789 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 FKBP1BP68106 108 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 CLCQ05315 142 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 GRAPQ13588 217 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 RASIP1Q5U651 963 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 HOMER1Q86YM7 354 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 GRAPLQ8TC17 118 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-222ENST00000544585 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
CPSF7-222ENST00000544585 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-222ENST00000544585 SPC25Q9HBM1 224 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 IFT57Q9NWB7 429 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 HDAC9Q9UKV0 1011 aa7.82□□□□□ -1.16
CPSF7-222ENST00000544585 THSD7BQ9C0I4 1608 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 YDJCA8MPS7 323 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 PSMD14O00487 310 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 RAB11FIP3O75154 756 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 RASGRF1Q13972 1273 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 CNGB1Q14028 1251 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-222ENST00000544585 PPP2R5EQ16537 467 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 ZNF423Q2M1K9 1284 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 TAF7LQ5H9L4 462 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 FOXR1Q6PIV2 292 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 SYT9Q86SS6 491 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 LILRB2Q8N423 598 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 TRERF1Q96PN7 1200 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 EYA3Q99504 573 aa7.81□□□□□ -1.16
CPSF7-222ENST00000544585 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
CPSF7-222ENST00000544585 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms