RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TTLL1O95922 423 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 SCYL2Q6P3W7 929 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 LRRC8AQ8IWT6 810 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.159e-10■□□□□ 8.5
CHD4-211ENST00000544484 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 PCDHA4Q9UN74 947 aa14.09□□□□□ -0.15
CHD4-211ENST00000544484 ERCC6LQ2NKX8 1250 aa14.08□□□□□ -0.15
CHD4-211ENST00000544484 DPCR1Q3MIW9 517 aa14.08□□□□□ -0.15
CHD4-211ENST00000544484 LRCH2Q5VUJ6 765 aa14.08□□□□□ -0.15
CHD4-211ENST00000544484 FOXP1Q9H334 677 aaPredicted RBP14.08□□□□□ -0.15
CHD4-211ENST00000544484 TSKSQ9UJT2 592 aa14.08□□□□□ -0.15
CHD4-211ENST00000544484 KRT15P19012 456 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
CHD4-211ENST00000544484 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 CCDC89Q8N998 374 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 TBC1D8O95759 1140 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■■■□ 24.8
CHD4-211ENST00000544484 USP17L3A6NCW0 530 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 USP17L4A6NCW7 530 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 CYP27B1O15528 508 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 KRT71Q3SY84 523 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 GPATCH4Q5T3I0 446 aaKnown RBP14.08□□□□□ -0.16
CHD4-211ENST00000544484 MCTP2Q6DN12 878 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 USP17L1Q7RTZ2 530 aa14.08□□□□□ -0.16
CHD4-211ENST00000544484 CFAP74Q9C0B2 1584 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 KIF23Q02241 960 aaPredicted RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 EPHA10Q5JZY3 1008 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 TRIM58Q8NG06 486 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 CNOT6LQ96LI5 555 aaKnown RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 BBOX1O75936 387 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 VPS37BQ9H9H4 285 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 CLASP1Q7Z460 1538 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 CRCPO75575 148 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 COPB1P53618 953 aaKnown RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 CASP14P31944 242 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 MECOMQ03112 1051 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 DMP1Q13316 513 aaPredicted RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 TAB3Q8N5C8 712 aaPredicted RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 P4HA1P13674 534 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 STIM2Q9P246 746 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 KCNG1Q9UIX4 513 aa14.07□□□□□ -0.16
CHD4-211ENST00000544484 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
CHD4-211ENST00000544484 MEIS1O00470 390 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 GABPAQ06546 454 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 MGARPQ8TDB4 240 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 KRIT1O00522 736 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 FOSP01100 380 aaPredicted RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 OAS2P29728 719 aaKnown RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 IFRD2Q12894 506 aaPredicted RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 CEP128Q6ZU80 1094 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ERVV-1B6SEH8 477 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 KRT27Q7Z3Y8 459 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 MRFAP1L1Q96HT8 127 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 BCL2L12Q9HB09 334 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ANKARQ7Z5J8 1434 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 HHATQ5VTY9 493 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 KRT26Q7Z3Y9 468 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 CCT6BQ92526 530 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 PPP6R2O75170 966 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 NAA35Q5VZE5 725 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 CC2D2BQ6DHV5 1058 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 DPH5Q9H2P9 285 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 POLR3EQ9NVU0 708 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 SWAP70Q9UH65 585 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ARAP3Q8WWN8 1544 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ATF7P17544 494 aaPredicted RBP14.06□□□□□ -0.16
CHD4-211ENST00000544484 CAPN12Q6ZSI9 719 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 IQCDQ96DY2 449 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 MED10Q9BTT4 135 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 SPC25Q9HBM1 224 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 ANAPC4Q9UJX5 808 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
CHD4-211ENST00000544484 SH3BP5O60239 455 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
CHD4-211ENST00000544484 FYB2Q5VWT5 728 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms