RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 OGFRQ9NZT2 677 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 GUCA1BQ9UMX6 200 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 ADGRG1Q9Y653 693 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 POLR3GO15318 223 aaPredicted RBP17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 STX10O60499 249 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 TCP11X2Q5H9J9 407 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 L2HGDHQ9H9P8 463 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.435e-8■■□□□ 13.1
SNRNP70-203ENST00000544278 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 CCDC155Q8N6L0 562 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 AGPAT5Q9NUQ2 364 aa17.73■□□□□ 0.43
SNRNP70-203ENST00000544278 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 USP17L10C9JJH3 530 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 PDHBP11177 359 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 ENOX2Q16206 610 aaKnown RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 ZNF658Q5TYW1 1059 aaPredicted RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 SLC35F6Q8N357 371 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 M0R2N6 131 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 MARCH6O60337 910 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 GDF11O95390 407 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 BMP15O95972 392 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 CCDC175P0C221 793 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 ZHX3Q9H4I2 956 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 PPP4CP60510 307 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 MRPS25P82663 173 aaKnown RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 CYP27A1Q02318 531 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 PPP2R3AQ06190 1150 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 HDAC6Q9UBN7 1215 aa17.72■□□□□ 0.43
SNRNP70-203ENST00000544278 KLRC4O43908 158 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 CSGALNACT2Q8N6G5 542 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 TCP11L1Q9NUJ3 509 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 POLRMTO00411 1230 aaKnown RBP17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 RHOXF2BP0C7M4 288 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 ANKRD40Q6AI12 368 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 RHOXF2Q9BQY4 288 aa17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 DDX41Q9UJV9 622 aaKnown RBP17.71■□□□□ 0.43
SNRNP70-203ENST00000544278 GYS2P54840 703 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 NEK8Q86SG6 692 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 SPICE1Q8N0Z3 855 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 DRC1Q96MC2 740 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 MMTAG2Q9BU76 263 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 SUGCTQ9HAC7 445 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 KIF2AO00139 706 aaPredicted RBP17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 GNAQP50148 359 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 APBA1Q02410 837 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 DUSP10Q9Y6W6 482 aa17.7■□□□□ 0.42
SNRNP70-203ENST00000544278 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 TADA3O75528 432 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 PBX1P40424 430 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 IKQ13123 557 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 USH1GQ495M9 461 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 ADSSL1Q8N142 457 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 RWDD2AQ9UIY3 292 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 PLEKP08567 350 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 CHRNA5P30532 468 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 NCAPH2Q6IBW4 605 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 CAPZA3Q96KX2 299 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 PSMB7Q99436 277 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 BCAS3Q9H6U6 928 aa17.69■□□□□ 0.42
SNRNP70-203ENST00000544278 MMP10P09238 476 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 STAT3P40763 770 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 ECM1Q16610 540 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 TRMT1LQ7Z2T5 733 aaKnown RBP17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 KRT26Q7Z3Y9 468 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 GDAP1L1Q96MZ0 367 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms