RNA–Protein interactions for RNA: ENST00000544118.5

CYB561A3-219, Transcript of cytochrome b561 family member A3, humanhuman

TSL 5 BASIC

Gene CYB561A3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-219ENST00000544118 TIMP1P01033 207 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 CDK7P50613 346 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 NSMFQ6X4W1 530 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 FAM161BQ96MY7 647 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 TTC14Q96N46 770 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 GUCD1Q96NT3 240 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
CYB561A3-219ENST00000544118 TLR3O15455 904 aaKnown RBP17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 CABYRO75952 493 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 SYDE2Q5VT97 1194 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 ZNF589Q86UQ0 364 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
CYB561A3-219ENST00000544118 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 CTAGE5O15320 804 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 ZEB2O60315 1214 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 SLC16A2P36021 539 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 NT5C2P49902 561 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 EPHB4P54760 987 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 SEZ6LQ9BYH1 1024 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 VTA1Q9NP79 307 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 Q9Y3F1 56 aa17.12■□□□□ 0.33
CYB561A3-219ENST00000544118 COL6A3P12111 3177 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 SDSP20132 328 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 HAND2P61296 217 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 BEX3Q00994 111 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 FSCN1Q16658 493 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 ESR2Q92731 530 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 OSBPL3Q9H4L5 887 aa17.11■□□□□ 0.33
CYB561A3-219ENST00000544118 TMEM265A0A087WTH1 108 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 PDHBP11177 359 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 SMPD1P17405 629 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 EEPD1Q7L9B9 569 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 CDX2Q99626 313 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 ASTN1O14525 1302 aa17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
CYB561A3-219ENST00000544118 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 ZNF213O14771 459 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 NUCB1Q02818 461 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 CCDC178Q5BJE1 867 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 CXCL17Q6UXB2 119 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 PDGFCQ9NRA1 345 aa17.09■□□□□ 0.33
CYB561A3-219ENST00000544118 HIP1O00291 1037 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 SNHG28P0DPA3 235 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 ALDH5A1P51649 535 aaPredicted RBP17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 TBC1D10CQ8IV04 446 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
CYB561A3-219ENST00000544118 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 NFIBO00712 420 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 CD4P01730 458 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 RNF207Q6ZRF8 634 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
CYB561A3-219ENST00000544118 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms