RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 INCENPQ9NQS7 918 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 IL17RBQ9NRM6 502 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.8■■□□□ 1.88
CDKN3-207ENST00000543789 PCDHB15Q9Y5E8 787 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 SNAP25P60880 206 aa26.79■■□□□ 1.88
CDKN3-207ENST00000543789 FSCN1Q16658 493 aaKnown RBP26.79■■□□□ 1.88
CDKN3-207ENST00000543789 PSRC1Q6PGN9 363 aaPredicted RBP26.79■■□□□ 1.88
CDKN3-207ENST00000543789 TLK2Q86UE8 772 aa26.79■■□□□ 1.88
CDKN3-207ENST00000543789 SLC43A3Q8NBI5 491 aa26.79■■□□□ 1.88
CDKN3-207ENST00000543789 PRR12Q9ULL5 1215 aa26.79■■□□□ 1.88
CDKN3-207ENST00000543789 ASTN1O14525 1302 aa26.79■■□□□ 1.88
CDKN3-207ENST00000543789 DYNC1LI2O43237 492 aaPredicted RBP26.78■■□□□ 1.88
CDKN3-207ENST00000543789 ZEB2O60315 1214 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 SMPD1P17405 629 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 MX1P20591 662 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 CYP2C18P33260 490 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 CTDSPL2Q05D32 466 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 IQSEC1Q6DN90 963 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 SYMPKQ92797 1274 aaKnown RBP26.78■■□□□ 1.88
CDKN3-207ENST00000543789 PBX4Q9BYU1 374 aa26.78■■□□□ 1.88
CDKN3-207ENST00000543789 GRXCR1A8MXD5 290 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 NMT2O60551 498 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 PBX2P40425 430 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 MUM1L1Q5H9M0 696 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 IL23AQ9NPF7 189 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 CYP39A1Q9NYL5 469 aa26.77■■□□□ 1.88
CDKN3-207ENST00000543789 PRUNE2Q8WUY3 3088 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 FOXP2O15409 715 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 RANBP6O60518 1105 aaKnown RBP26.76■■□□□ 1.87
CDKN3-207ENST00000543789 ITGA7Q13683 1181 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 TAPT1Q6NXT6 567 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 EEPD1Q7L9B9 569 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 SEZ6LQ9BYH1 1024 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 HIPK3Q9H422 1215 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 PDGFCQ9NRA1 345 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 ANAPC4Q9UJX5 808 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 CCPG1Q9ULG6 757 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 MTMR7Q9Y216 660 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 Q9Y3F1 56 aa26.76■■□□□ 1.87
CDKN3-207ENST00000543789 DDX49Q9Y6V7 483 aaKnown RBP26.76■■□□□ 1.87
CDKN3-207ENST00000543789 NSMFQ6X4W1 530 aa26.75■■□□□ 1.87
CDKN3-207ENST00000543789 HERVK_113Q902F9 699 aa26.75■■□□□ 1.87
CDKN3-207ENST00000543789 ICAM1P05362 532 aa26.74■■□□□ 1.87
CDKN3-207ENST00000543789 PTGS1P23219 599 aa26.74■■□□□ 1.87
CDKN3-207ENST00000543789 NOVP48745 357 aa26.74■■□□□ 1.87
CDKN3-207ENST00000543789 CCDC96Q2M329 555 aa26.74■■□□□ 1.87
CDKN3-207ENST00000543789 FBXO16Q8IX29 292 aaPredicted RBP26.74■■□□□ 1.87
CDKN3-207ENST00000543789 USP38Q8NB14 1042 aa26.74■■□□□ 1.87
CDKN3-207ENST00000543789 GAS2L1Q99501 681 aaPredicted RBP26.74■■□□□ 1.87
CDKN3-207ENST00000543789 MTIF3Q9H2K0 278 aaKnown RBP26.74■■□□□ 1.87
CDKN3-207ENST00000543789 MYH4Q9Y623 1939 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 GRIN2DO15399 1336 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 FGBP02675 491 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 KIAA1211Q6ZU35 1233 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 RASGRP2Q7LDG7 609 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 DCAF4Q8WV16 495 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 VTA1Q9NP79 307 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 MSRAQ9UJ68 235 aa26.73■■□□□ 1.87
CDKN3-207ENST00000543789 ORC4O43929 436 aa26.72■■□□□ 1.87
CDKN3-207ENST00000543789 VPS53Q5VIR6 699 aa26.72■■□□□ 1.87
CDKN3-207ENST00000543789 MORC4Q8TE76 937 aa26.72■■□□□ 1.87
CDKN3-207ENST00000543789 PURBQ96QR8 312 aaKnown RBP26.72■■□□□ 1.87
CDKN3-207ENST00000543789 TRPV6Q9H1D0 765 aa26.72■■□□□ 1.87
CDKN3-207ENST00000543789 RANBP17Q9H2T7 1088 aaKnown RBP26.72■■□□□ 1.87
CDKN3-207ENST00000543789 ZBTB47Q9UFB7 747 aaPredicted RBP26.72■■□□□ 1.87
CDKN3-207ENST00000543789 FGRP09769 529 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 ALX1Q15699 326 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 RAB30Q15771 203 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 TMEM63BQ5T3F8 832 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 TTBK2Q6IQ55 1244 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 EVI5LQ96CN4 794 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 PRDM12Q9H4Q4 367 aa26.71■■□□□ 1.87
CDKN3-207ENST00000543789 CXXC1Q9P0U4 656 aaPredicted RBP26.71■■□□□ 1.87
CDKN3-207ENST00000543789 ADD3Q9UEY8 706 aaKnown RBP26.71■■□□□ 1.87
CDKN3-207ENST00000543789 UMODL1Q5DID0 1318 aa26.7■■□□□ 1.87
CDKN3-207ENST00000543789 B4GALT4O60513 344 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 SLC16A2P36021 539 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 CCL23P55773 120 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 PSMC6P62333 389 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 BAATQ14032 418 aaPredicted RBP26.7■■□□□ 1.86
CDKN3-207ENST00000543789 TJAP1Q5JTD0 557 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 BTNL9Q6UXG8 535 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 NOC4LQ9BVI4 516 aaKnown RBP26.7■■□□□ 1.86
CDKN3-207ENST00000543789 HELLSQ9NRZ9 838 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 TOMM22Q9NS69 142 aa26.7■■□□□ 1.86
CDKN3-207ENST00000543789 SALL3Q9BXA9 1300 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 DUSP28Q4G0W2 176 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 AKNAD1Q5T1N1 836 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 ANKRD45Q5TZF3 282 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 SYDE2Q5VT97 1194 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 OTOP2Q7RTS6 562 aa26.69■■□□□ 1.86
CDKN3-207ENST00000543789 TOP1P11387 765 aaKnown RBP26.68■■□□□ 1.86
CDKN3-207ENST00000543789 RPUSD2Q8IZ73 545 aaKnown RBP26.68■■□□□ 1.86
CDKN3-207ENST00000543789 PPM1EQ8WY54 764 aa26.68■■□□□ 1.86
CDKN3-207ENST00000543789 SPTBN5Q9NRC6 3674 aaKnown RBP26.68■■□□□ 1.86
CDKN3-207ENST00000543789 LOC102724159A0A0B4J2E5 919 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 FGAP02671 866 aa26.67■■□□□ 1.86
CDKN3-207ENST00000543789 PWP2Q15269 919 aaKnown RBP26.67■■□□□ 1.86
CDKN3-207ENST00000543789 RRP12Q5JTH9 1297 aaKnown RBP26.67■■□□□ 1.86
CDKN3-207ENST00000543789 TMEM47Q9BQJ4 181 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms