RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 VPS16Q9H269 839 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 COL11A2P13942 1736 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 H7C1D1 291 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 EDIL3O43854 480 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 ALDH1B1P30837 517 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 SHMT1P34896 483 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 FXR1P51114 621 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 SEMA3FQ13275 785 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 ELF2Q15723 593 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 APOBEC3HQ6NTF7 200 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 CDC42EP5Q6NZY7 148 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 GIMAP8Q8ND71 665 aaPredicted RBP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 NAA15Q9BXJ9 866 aaKnown RBP18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 SWAP70Q9UH65 585 aa18.11■□□□□ 0.49
SCNN1A-221ENST00000543768 TTLL1O95922 423 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 TECP42680 631 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 ORC2Q13416 577 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 RAD9BQ6WBX8 426 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 MMTAG2Q9BU76 263 aaKnown RBP18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 MAGEF1Q9HAY2 307 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 TAB2Q9NYJ8 693 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 GREB1LQ9C091 1923 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 MYO3BQ8WXR4 1341 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 FECHP22830 423 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 GPCPD1Q9NPB8 672 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 PARP3Q9Y6F1 533 aa18.1■□□□□ 0.49
SCNN1A-221ENST00000543768 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 ZNF543Q08ER8 600 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 MTMR9Q96QG7 549 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 WDR24Q96S15 920 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 TRIM9Q9C026 710 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 MRPL44Q9H9J2 332 aaKnown RBP18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 MYH4Q9Y623 1939 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 C10orf71Q711Q0 1435 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 CNGA4Q8IV77 575 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 JMJD4Q9H9V9 463 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 ADGRG1Q9Y653 693 aa18.09■□□□□ 0.49
SCNN1A-221ENST00000543768 RNF225M0QZC1 329 aaPredicted RBP18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 PDE6BP35913 854 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 NFIAQ12857 509 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 ANKRD20A12PQ8NF67 263 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 TEKT1Q969V4 418 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 CCDC51Q96ER9 411 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 C7orf25Q9BPX7 421 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 URI1O94763 535 aaPredicted RBP18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 CCDC175P0C221 793 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 SLURP2P0DP57 97 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 ADCY7P51828 1080 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 GNG11P61952 73 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 ERCC6LQ2NKX8 1250 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 CREBRFQ8IUR6 639 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 MASTLQ96GX5 879 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 KCNQ5Q9NR82 932 aa18.08■□□□□ 0.48
SCNN1A-221ENST00000543768 PNMA6FA0A0J9YX94 578 aa18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 PPP1R11O60927 126 aaPredicted RBP18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 TTBK2Q6IQ55 1244 aa18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 TTI2Q6NXR4 508 aa18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 ZFPM1Q8IX07 1006 aa18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SCNN1A-221ENST00000543768 PLSCR1O15162 318 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 MMP10P09238 476 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 TXKP42681 527 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 STIM1Q13586 685 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 KIFC2Q96AC6 838 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 PSMA7O14818 248 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 SLC37A4O43826 429 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 CASQ1P31415 396 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 CRKP46108 304 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 FBXO38Q6PIJ6 1188 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 DHTKD1Q96HY7 919 aaPredicted RBP18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 FEZ1Q99689 392 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 SRRTQ9BXP5 876 aaKnown RBP18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 THAP9Q9H5L6 903 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 ABHD10Q9NUJ1 306 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 SIPA1L1O43166 1804 aa18.06■□□□□ 0.48
SCNN1A-221ENST00000543768 G3V3G9 751 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 TDP2O95551 362 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 HLA-DOAP06340 250 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 UBXN1Q04323 297 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 CALCRLQ16602 461 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 DCAF8Q5TAQ9 597 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 DUSP9Q99956 384 aaKnown RBP18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 DBNDD1Q9H9R9 158 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 RIC8AQ9NPQ8 531 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 A0A0U1RQJ8 604 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 TPM1P09493 284 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 EEF1GP26641 437 aaKnown RBP18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 MAP3K9P80192 1104 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 PDE4DQ08499 809 aa18.05■□□□□ 0.48
SCNN1A-221ENST00000543768 STK4Q13043 487 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms