RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MCF2L2Q86YR7 1114 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 NECAB1Q8N987 351 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 IL27Q8NEV9 243 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 SOCS4Q8WXH5 440 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 PHKBQ93100 1093 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 KIF2CQ99661 725 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 RIOX1Q9H6W3 641 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 SRRDQ9UH36 339 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 GABRQQ9UN88 632 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 MRPL11Q9Y3B7 192 aaKnown RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 RIPK3Q9Y572 518 aa7.3□□□□□ -1.24
LTBR-212ENST00000543542 V9GY48 417 aaPredicted RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 RBBP6Q7Z6E9 1792 aaKnown RBP7.3□□□□□ -1.24
LTBR-212ENST00000543542 PFASO15067 1338 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 ZNF536O15090 1300 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CNTNAP5Q8WYK1 1306 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 ZNFX1Q9P2E3 1918 aaKnown RBP7.29□□□□□ -1.24
LTBR-212ENST00000543542 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CYTH3O43739 400 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 PFKFB2O60825 505 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CFBP00751 764 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CALML3P27482 149 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 ADORA2AP29274 412 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CTGFP29279 349 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 MCM2P49736 904 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 FLT3LGP49771 235 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 NAPAP54920 295 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 EVCP57679 992 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 SCRN1Q12765 414 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 MAP2K5Q13163 448 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 PKN2Q16513 984 aaKnown RBP7.29□□□□□ -1.24
LTBR-212ENST00000543542 ME3Q16798 604 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 MUM1L1Q5H9M0 696 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 RNF207Q6ZRF8 634 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 GPKOWQ92917 476 aaPredicted RBP eCLIP7.29□□□□□ -1.24
LTBR-212ENST00000543542 CUL5Q93034 780 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 SH2B1Q9NRF2 756 aaPredicted RBP7.29□□□□□ -1.24
LTBR-212ENST00000543542 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
LTBR-212ENST00000543542 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
LTBR-212ENST00000543542 PLXNA1Q9UIW2 1896 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 NFIBO00712 420 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 PRPF3O43395 683 aaKnown RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 ADCY3O60266 1144 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 LARGE1O95461 756 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 PGK2P07205 417 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 IFNAR1P17181 557 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 XBP1P17861 261 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 GRB14Q14449 540 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 SLC9C1Q4G0N8 1177 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 FBXO46Q6PJ61 603 aaPredicted RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 ABRAQ8N0Z2 381 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 FAM184AQ8NB25 1140 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 SMARCC2Q8TAQ2 1214 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 CCDC12Q8WUD4 166 aaPredicted RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 WASF1Q92558 559 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 GTF3C6Q969F1 213 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 MTMR8Q96EF0 704 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 MPHOSPH6Q99547 160 aaKnown RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 APBA2Q99767 749 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 RNF26Q9BY78 433 aaPredicted RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
LTBR-212ENST00000543542 PTPN22Q9Y2R2 807 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 PTCH2Q9Y6C5 1203 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 NID2Q14112 1375 aa7.28□□□□□ -1.24
LTBR-212ENST00000543542 BAZ2BQ9UIF8 2168 aaKnown RBP7.27□□□□□ -1.24
LTBR-212ENST00000543542 B4DLN1 442 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 GCOM1H8Y6P7 765 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 hCG_1984214I3L0E3 225 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 PPP1R11O60927 126 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 DEXIO95424 95 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 HSP90AA1P07900 732 aaKnown RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 POLR2MP0CAP2 368 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 SCG2P13521 617 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 ELNP15502 786 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 GRK4P32298 578 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 ADCY7P51828 1080 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 MRPL12P52815 198 aaKnown RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 FOSBP53539 338 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 UBXN2AP68543 259 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 CAP1Q01518 475 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 BAATQ14032 418 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 TRIM29Q14134 588 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 PFKFB3Q16875 520 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 SLC35G1Q2M3R5 365 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 MORN1Q5T089 497 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 MFSD14CQ5VZR4 134 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 WWC2Q6AWC2 1192 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 SLC30A10Q6XR72 485 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 FCHSD1Q86WN1 690 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 HSCBQ8IWL3 235 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 ZNF713Q8N859 430 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 SLAIN1Q8ND83 568 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 CCDC148Q8NFR7 591 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 MCOLN1Q9GZU1 580 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms