RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 AHCYL1O43865 530 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 ATP6V1G1O75348 118 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDH4-201ENST00000543233 FKBP15Q5T1M5 1219 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 DPF2Q92785 391 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 ZMYM6O95789 1325 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 BTBD18B2RXH4 712 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 KCTD16Q68DU8 428 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 TCP11Q8WWU5 503 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 CCDC47Q96A33 483 aaKnown RBP12.54□□□□□ -0.4
CDH4-201ENST00000543233 MTRQ99707 1265 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
CDH4-201ENST00000543233 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
CDH4-201ENST00000543233 MYO5AQ9Y4I1 1855 aaKnown RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 ERICH2A1L162 156 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 ZSCAN9O15535 394 aaPredicted RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 PFKFB1P16118 471 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 WTAPQ15007 396 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 ACBD5Q5T8D3 534 aaPredicted RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 MFN1Q8IWA4 741 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 SLC3A2P08195 630 aaKnown RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 MAGEA10P43363 369 aaPredicted RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 MTF1Q14872 753 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 CCDC175P0C221 793 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
CDH4-201ENST00000543233 NR5A1Q13285 461 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
CDH4-201ENST00000543233 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 SLIT2O94813 1529 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 ITGB4P16144 1822 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 ZBED6P86452 979 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 PHACTR1Q9C0D0 580 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.4
CDH4-201ENST00000543233 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.4
CDH4-201ENST00000543233 GNPATO15228 680 aa12.52□□□□□ -0.41
CDH4-201ENST00000543233 SMNDC1O75940 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDH4-201ENST00000543233 FESP07332 822 aa12.52□□□□□ -0.41
CDH4-201ENST00000543233 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.41
CDH4-201ENST00000543233 RTN1Q16799 776 aa12.52□□□□□ -0.41
CDH4-201ENST00000543233 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
CDH4-201ENST00000543233 TSHZ1Q6ZSZ6 1077 aa12.52□□□□□ -0.41
CDH4-201ENST00000543233 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
CDH4-201ENST00000543233 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 CAPN15O75808 1086 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 SEC24CP53992 1094 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 RBM12BQ8IXT5 1001 aaKnown RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 SLC35F6Q8N357 371 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 L3MBTL1Q9Y468 752 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 E7EVH7 732 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 TUBBP07437 444 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 SYKP43405 635 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 CTCFP49711 727 aaPredicted RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 ROR2Q01974 943 aaKnown RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 PPARAQ07869 468 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 PNOCQ13519 176 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 PLCB4Q15147 1175 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 HIBCHQ6NVY1 386 aaPredicted RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 BRAPQ7Z569 592 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 DYDC1Q8WWB3 177 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 GPR101Q96P66 508 aaPredicted RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDH4-201ENST00000543233 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 MXRA7P84157 204 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 GUCY1A3Q02108 690 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 GRIN1Q05586 938 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 INF2Q27J81 1249 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
CDH4-201ENST00000543233 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
CDH4-201ENST00000543233 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
CDH4-201ENST00000543233 NWD2Q9ULI1 1742 aa12.5□□□□□ -0.41
CDH4-201ENST00000543233 ANP32DO95626 131 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms