RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 PTGS1P23219 599 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 SLC16A2P36021 539 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 HAND2P61296 217 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 FPGSQ05932 587 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 GNASQ5JWF2 1037 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 TTBK2Q6IQ55 1244 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 TMEM47Q9BQJ4 181 aa23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 RANBP17Q9H2T7 1088 aaKnown RBP23.18■■□□□ 1.3
CACNA1C-230ENST00000543114 FRMPD2Q68DX3 1309 aaPredicted RBP23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 ASB14A6NK59 587 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 DLL1O00548 723 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 ICAM1P05362 532 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 SMAD3P84022 425 aaKnown RBP23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 BEX3Q00994 111 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 RNPC3Q96LT9 517 aaKnown RBP23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 PRUNE2Q8WUY3 3088 aa23.17■■□□□ 1.3
CACNA1C-230ENST00000543114 MROH7Q68CQ1 1323 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 A0A0U1RQG5 324 aaPredicted RBP23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 TRIM6-TRIM34B2RNG4 842 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 TOP1P11387 765 aaKnown RBP23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 CDK7P50613 346 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 NKX3-2P78367 333 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 NSMFQ6X4W1 530 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 TICAM2Q86XR7 235 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 FBXO16Q8IX29 292 aaPredicted RBP23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 GNEQ9Y223 722 aaKnown RBP23.16■■□□□ 1.3
CACNA1C-230ENST00000543114 CUL9Q8IWT3 2517 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 SYDE2Q5VT97 1194 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 BTNL9Q6UXG8 535 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 TLK2Q86UE8 772 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 RILPL2Q969X0 211 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 TTYH1Q9H313 450 aaPredicted RBP23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 TCP11L1Q9NUJ3 509 aa23.15■■□□□ 1.3
CACNA1C-230ENST00000543114 ARVCFO00192 962 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 TIMP1P01033 207 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 PDHBP11177 359 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 NOL8Q76FK4 1167 aaKnown RBP23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 EEPD1Q7L9B9 569 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 FAM126BQ8IXS8 530 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 VTI1AQ96AJ9 217 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 CDX2Q99626 313 aaPredicted RBP23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 GPCPD1Q9NPB8 672 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.29
CACNA1C-230ENST00000543114 NEDD4P46934 1319 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 NFIBO00712 420 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 SMPD1P17405 629 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 AKNAD1Q5T1N1 836 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 TMEM63BQ5T3F8 832 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 SEMA6BQ9H3T3 888 aa23.13■■□□□ 1.29
CACNA1C-230ENST00000543114 AAMPQ13685 434 aa23.12■■□□□ 1.29
CACNA1C-230ENST00000543114 TAPT1Q6NXT6 567 aa23.12■■□□□ 1.29
CACNA1C-230ENST00000543114 CXCL17Q6UXB2 119 aa23.12■■□□□ 1.29
CACNA1C-230ENST00000543114 PLEKHM2Q8IWE5 1019 aa23.12■■□□□ 1.29
CACNA1C-230ENST00000543114 MORC4Q8TE76 937 aa23.12■■□□□ 1.29
CACNA1C-230ENST00000543114 IGHDP01880 384 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 SDSP20132 328 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 BAATQ14032 418 aaPredicted RBP23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 FSCN1Q16658 493 aaKnown RBP23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 MFSD5Q6N075 450 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 SLC30A10Q6XR72 485 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 MFSD6Q6ZSS7 791 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 CHD1LQ86WJ1 897 aa23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.11■■□□□ 1.29
CACNA1C-230ENST00000543114 VCANP13611 3396 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 SNHG28P0DPA3 235 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 PCP11498 1178 aaKnown RBP23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 ALDH5A1P51649 535 aaPredicted RBP23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 ZNF543Q08ER8 600 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 PPP1R12CQ9BZL4 782 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 RWDD1Q9H446 243 aaPredicted RBP23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 OSBPL3Q9H4L5 887 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 VTA1Q9NP79 307 aa23.1■■□□□ 1.29
CACNA1C-230ENST00000543114 DYNC1LI2O43237 492 aaPredicted RBP23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 CD4P01730 458 aa23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 NUCB1Q02818 461 aa23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 SLC43A3Q8NBI5 491 aa23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 CLEC4DQ8WXI8 215 aa23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 AP5M1Q9H0R1 490 aa23.09■■□□□ 1.29
CACNA1C-230ENST00000543114 GRIN2DO15399 1336 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 PTPDC1A2A3K4 754 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 TLR3O15455 904 aaKnown RBP23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 CSF2RAP15509 400 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 MFAP1P55081 439 aaKnown RBP23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 IQSEC1Q6DN90 963 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 MYLIPQ8WY64 445 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 TTC14Q96N46 770 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 ZKSCAN3Q9BRR0 538 aa23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 RNF41Q9H4P4 317 aaPredicted RBP23.08■■□□□ 1.29
CACNA1C-230ENST00000543114 TMEM265A0A087WTH1 108 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 CABYRO75952 493 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 PPIGQ13427 754 aaKnown RBP eCLIP23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 TMEM240Q5SV17 173 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms