RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 MPZL3Q6UWV2 235 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 SIRT2Q8IXJ6 389 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 COPS5Q92905 334 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 JMJD8Q96S16 334 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 CYP26B1Q9NR63 512 aa6.17□□□□□ -1.42
MDM2-229ENST00000543046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.17□□□□□ -1.42
MDM2-229ENST00000543046 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 PDPK1O15530 556 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 DNAJC2Q99543 621 aaKnown RBP6.16□□□□□ -1.42
MDM2-229ENST00000543046 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 SLC6A17Q9H1V8 727 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 IMPACTQ9P2X3 320 aa6.16□□□□□ -1.42
MDM2-229ENST00000543046 YBX2Q9Y2T7 364 aaKnown RBP6.16□□□□□ -1.42
MDM2-229ENST00000543046 LRRC10BA6NIK2 292 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 SNRPB2P08579 225 aaKnown RBP6.15□□□□□ -1.42
MDM2-229ENST00000543046 PRKCAP17252 672 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 PAMP19021 973 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 HOXC12P31275 282 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 PPP2R2AP63151 447 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 CYP4F3Q08477 520 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 LAPTM5Q13571 262 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 RASGRF1Q13972 1273 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 MLANAQ16655 118 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 NUP43Q8NFH3 380 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 SGSM3Q96HU1 749 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 INTS4Q96HW7 963 aaKnown RBP6.15□□□□□ -1.42
MDM2-229ENST00000543046 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 GPRC5CQ9NQ84 441 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 CLEC1BQ9P126 229 aa6.15□□□□□ -1.42
MDM2-229ENST00000543046 TRBV23OR9-2A0A075B6M9 112 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 NPHP3-ACAD11A0A0J9YXS1 232 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 CAPNS1P04632 268 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 THBDP07204 575 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 PNLIPP16233 465 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 L1CAMP32004 1257 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 SF1Q15637 639 aaKnown RBP6.14□□□□□ -1.43
MDM2-229ENST00000543046 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 CPNE8Q86YQ8 564 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 ACSL6Q9UKU0 697 aa6.14□□□□□ -1.43
MDM2-229ENST00000543046 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 A0A1W2PQC6 194 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 CPP00450 1065 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 SCG5P05408 212 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 PLS3P13797 630 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 ECI1P42126 302 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 GRIA2P42262 883 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 KCNJ6P48051 423 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 GFRA1P56159 465 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 CYP4F8P98187 520 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 RASA3Q14644 834 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 MTERF2Q49AM1 385 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 ADGRF1Q5T601 910 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 LRRC47Q8N1G4 583 aaKnown RBP6.13□□□□□ -1.43
MDM2-229ENST00000543046 NPLOC4Q8TAT6 608 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 FRS2Q8WU20 508 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 UBXN4Q92575 508 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 ZNF669Q96BR6 464 aaPredicted RBP6.13□□□□□ -1.43
MDM2-229ENST00000543046 CCDC140Q96MF4 163 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 DEPDC7Q96QD5 511 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 DIRC2Q96SL1 478 aa6.13□□□□□ -1.43
MDM2-229ENST00000543046 NSUN3Q9H649 340 aaKnown RBP6.13□□□□□ -1.43
MDM2-229ENST00000543046 MSL3P1P0C860 447 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 PDE6BP35913 854 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 ARL4AP40617 200 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 CORO7P57737 925 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 MVKQ03426 396 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 HSP90AA2PQ14568 343 aaPredicted RBP6.12□□□□□ -1.43
MDM2-229ENST00000543046 PRSS53Q2L4Q9 553 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 OGFOD2Q6N063 350 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 LRP10Q7Z4F1 713 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 MKL1Q969V6 931 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 SRPK1Q96SB4 655 aaKnown RBP6.12□□□□□ -1.43
MDM2-229ENST00000543046 MMP19Q99542 508 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 AARSD1Q9BTE6 412 aaKnown RBP6.12□□□□□ -1.43
MDM2-229ENST00000543046 OSBPL2Q9H1P3 480 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 SNTG2Q9NY99 539 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
MDM2-229ENST00000543046 C7orf72A4D263 438 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 FAM221BA6H8Z2 402 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 IFRD2Q12894 506 aaPredicted RBP6.11□□□□□ -1.43
MDM2-229ENST00000543046 TMEM145Q8NBT3 493 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 NLGN2Q8NFZ4 835 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 IER2Q9BTL4 223 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 SPATA9Q9BWV2 254 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 EPB41L4BQ9H329 900 aa6.11□□□□□ -1.43
MDM2-229ENST00000543046 DCP1AQ9NPI6 582 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms