RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-209	ENST00000542717	EFCAB14	O75071	495 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SLC25A27	O95847	323 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SNAI1	O95863	264 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	AMH	P03971	560 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SMPD1	P17405	629 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	ATF7	P17544	494 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	CHMP4BP1	P59074	171 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	JAG1	P78504	1218 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SHC2	P98077	582 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	TNFAIP2	Q03169	654 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	COASY	Q13057	564 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	RAB3GAP1	Q15042	981 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	ZNF792	Q3KQV3	632 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SPECC1	Q5M775	1068 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	CWF19L1	Q69YN2	538 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	IL31	Q6EBC2	164 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	CNKSR3	Q6P9H4	555 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	RBM23	Q86U06	439 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	MB21D1	Q8N884	522 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	KDF1	Q8NAX2	398 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SUMF1	Q8NBK3	374 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	GCN1	Q92616	2671 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	DDX11	Q96FC9	970 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	LMAN2L	Q9H0V9	348 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	SMOC2	Q9H3U7	446 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	ABHD16B	Q9H3Z7	469 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	GINM1	Q9NU53	330 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	GNL3L	Q9NVN8	582 aa	Known RBP	4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	PI4KB	Q9UBF8	816 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	ABCF2	Q9UG63	623 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	GMEB2	Q9UKD1	530 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	NR2E1	Q9Y466	385 aa		4.08	□□□□□ -1.76
CHD4-209	ENST00000542717	TET1	Q8NFU7	2136 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	COL11A1	P12107	1806 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	TMEM8B	A6NDV4	472 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	GRM6	O15303	877 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ADCY6	O43306	1168 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	FLOT1	O75955	427 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	UPP2	O95045	317 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	GH2	P01242	217 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ASGR2	P07307	311 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	SP9	P0CG40	484 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	HSPA5	P11021	654 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	NRIP1	P48552	1158 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	SLC4A3	P48751	1232 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	CASP7	P55210	303 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	FOXO4	P98177	505 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	C19orf57	Q0VDD7	668 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	LARP1B	Q659C4	914 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	TLK2	Q86UE8	772 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	MSL3	Q8N5Y2	521 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	CCDC155	Q8N6L0	562 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ADAM32	Q8TC27	787 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ATRIP	Q8WXE1	791 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	NOL10	Q9BSC4	688 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	APOL5	Q9BWW9	433 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	GPHN	Q9NQX3	736 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	CLEC1B	Q9P126	229 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	MYO10	Q9HD67	2058 aa		4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.07	□□□□□ -1.76
CHD4-209	ENST00000542717	ASPM	Q8IZT6	3477 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PTPRS	Q13332	1948 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	MYH2	Q9UKX2	1941 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	CTAGE5	O15320	804 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	NPM3	O75607	178 aa	Known RBP	4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PDE8B	O95263	885 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	HLA-DOA	P06340	250 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	MYL3	P08590	195 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	AR	P10275	920 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	MCAM	P43121	646 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	SPEM2	Q0P670	501 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	CCDC30	Q5VVM6	783 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	C19orf48	Q6RUI8	117 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	ATF7IP	Q6VMQ6	1270 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PDZD3	Q86UT5	571 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	TEX11	Q8IYF3	940 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	SIX5	Q8N196	739 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	EFHB	Q8N7U6	833 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	ACER1	Q8TDN7	264 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	MICAL1	Q8TDZ2	1067 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	AFAP1L1	Q8TED9	768 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PPP1R13L	Q8WUF5	828 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PIK3R5	Q8WYR1	880 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	ATG4C	Q96DT6	458 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	NEK1	Q96PY6	1258 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	PLEKHF1	Q96S99	279 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	STK31	Q9BXU1	1019 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	CHMP4A	Q9BY43	222 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	KIAA1683	Q9H0B3	1180 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	DHX36	Q9H2U1	1008 aa	Known RBP	4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	CABP5	Q9NP86	173 aa		4.06	□□□□□ -1.76
CHD4-209	ENST00000542717	RAB23	Q9ULC3	237 aa		4.06	□□□□□ -1.76

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