RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 IMMTQ16891 758 aaKnown RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 GNASQ5JWF2 1037 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 FAM109BQ6ICB4 259 aaPredicted RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 TTBK2Q6IQ55 1244 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 DEFB123Q8N688 67 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 VTI1AQ96AJ9 217 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 LENG1Q96BZ8 264 aaPredicted RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 SEZ6LQ9BYH1 1024 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 MAF1Q9H063 256 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 Q9Y3F1 56 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 WDR19Q8NEZ3 1342 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
VTN-203ENST00000542029 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 B4DLN1 442 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 ASGR1P07306 291 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 RAG1P15918 1043 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 SLC16A2P36021 539 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
VTN-203ENST00000542029 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 BADQ92934 168 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
VTN-203ENST00000542029 KRT23Q9C075 422 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 VTA1Q9NP79 307 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
VTN-203ENST00000542029 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
VTN-203ENST00000542029 SZT2Q5T011 3432 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 SNAP25P60880 206 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 BAATQ14032 418 aaPredicted RBP13.36□□□□□ -0.27
VTN-203ENST00000542029 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 KAT14Q9H8E8 782 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
VTN-203ENST00000542029 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
VTN-203ENST00000542029 RAD50Q92878 1312 aa13.36□□□□□ -0.27
VTN-203ENST00000542029 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 ARVCFO00192 962 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 TLR3O15455 904 aaKnown RBP13.35□□□□□ -0.27
VTN-203ENST00000542029 KDM4AO75164 1064 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
VTN-203ENST00000542029 RASGRP2Q7LDG7 609 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 TLK2Q86UE8 772 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 RGS22Q8NE09 1264 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
VTN-203ENST00000542029 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 NEDD4P46934 1319 aa13.35□□□□□ -0.27
VTN-203ENST00000542029 ADCY6O43306 1168 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 CDK7P50613 346 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 FPGSQ05932 587 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 SHHQ15465 462 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 TTC22Q5TAA0 569 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 RNF207Q6ZRF8 634 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 DNERQ8NFT8 737 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
VTN-203ENST00000542029 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 B4E1Z4 1266 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 NFIBO00712 420 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 CTAGE5O15320 804 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 TIMP1P01033 207 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 SMPD1P17405 629 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 TRDNQ13061 729 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 BRDTQ58F21 947 aaPredicted RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 ZNF697Q5TEC3 545 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.28
VTN-203ENST00000542029 CLEC4DQ8WXI8 215 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 ZKSCAN3Q9BRR0 538 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 TBX21Q9UL17 535 aa13.33□□□□□ -0.28
VTN-203ENST00000542029 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 NKRFO15226 690 aaKnown RBP eCLIP13.32□□□□□ -0.28
VTN-203ENST00000542029 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 ITGB8P26012 769 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 CALML3P27482 149 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
VTN-203ENST00000542029 PDE4DQ08499 809 aa13.32□□□□□ -0.28
VTN-203ENST00000542029 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.28
VTN-203ENST00000542029 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms