RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 FAM26FQ5R3K3 315 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 SRGAP1Q7Z6B7 1085 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 UBLCP1Q8WVY7 318 aaPredicted RBP17.86■□□□□ 0.45
VARS2-212ENST00000542001 ARHGEF1Q92888 912 aaKnown RBP17.86■□□□□ 0.45
VARS2-212ENST00000542001 PRM3Q9NNZ6 103 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 DNM3Q9UQ16 869 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 CLIC2O15247 247 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 FCER1AP12319 257 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 EHHADHQ08426 723 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 ZNF658Q5TYW1 1059 aaPredicted RBP17.86■□□□□ 0.45
VARS2-212ENST00000542001 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 TCHPQ9BT92 498 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
VARS2-212ENST00000542001 NSMFQ6X4W1 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 DISC1Q9NRI5 854 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 RIMBP3CA6NJZ7 1639 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 RIMBP3BA6NNM3 1639 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 RIMBP3Q9UFD9 1639 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 CCDC169A6NNP5 214 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 FXR1P51114 621 aaKnown RBP eCLIP17.85■□□□□ 0.45
VARS2-212ENST00000542001 DPH6Q7L8W6 267 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 FOXP4Q8IVH2 680 aaPredicted RBP17.85■□□□□ 0.45
VARS2-212ENST00000542001 ZNF34Q8IZ26 560 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 LRRN4CLQ8ND94 238 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 IPO4Q8TEX9 1081 aaKnown RBP17.85■□□□□ 0.45
VARS2-212ENST00000542001 CEP95Q96GE4 821 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 MFAP3LO75121 409 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 P2RX5Q93086 422 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 NOX5Q96PH1 765 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 DDX41Q9UJV9 622 aaKnown RBP17.85■□□□□ 0.45
VARS2-212ENST00000542001 EVX2Q03828 476 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 C2orf54Q08AI8 447 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 ASIC2Q16515 512 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 TCP11X2Q5H9J9 407 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 NBPF11Q86T75 865 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 TBC1D5Q92609 795 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 LARP4BQ92615 738 aaKnown RBP17.85■□□□□ 0.45
VARS2-212ENST00000542001 MXD3Q9BW11 206 aa17.85■□□□□ 0.45
VARS2-212ENST00000542001 XDHP47989 1333 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 NDUFA10O95299 355 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 ZSCAN26Q16670 478 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 FAM76AQ8TAV0 307 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 FAN1Q9Y2M0 1017 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 TTC26A0AVF1 554 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 MOCS3O95396 460 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 SFMBT2Q5VUG0 894 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 SLFN13Q68D06 897 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 NSUN4Q96CB9 384 aaKnown RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 MRRFQ96E11 262 aaKnown RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 PLCD4Q9BRC7 762 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 FTCDO95954 541 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 TFRCP02786 760 aaKnown RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 TOB1P50616 345 aaPredicted RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 ADAM9Q13443 819 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 CERKLQ49MI3 558 aaPredicted RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 EARS2Q5JPH6 523 aaKnown RBP17.84■□□□□ 0.45
VARS2-212ENST00000542001 ABCB6Q9NP58 842 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 TCHHQ07283 1943 aa17.84■□□□□ 0.45
VARS2-212ENST00000542001 CAMTA2O94983 1202 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 DMTNQ08495 405 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 ALX1Q15699 326 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 SERPINB13Q9UIV8 391 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 SEPT7Q16181 437 aaKnown RBP17.83■□□□□ 0.45
VARS2-212ENST00000542001 CCDC84Q86UT8 332 aaPredicted RBP17.83■□□□□ 0.45
VARS2-212ENST00000542001 PAIP2Q9BPZ3 127 aaKnown RBP17.83■□□□□ 0.45
VARS2-212ENST00000542001 SELENOOQ9BVL4 669 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 GOLGA6AQ9NYA3 693 aa17.83■□□□□ 0.45
VARS2-212ENST00000542001 KCNK3O14649 394 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 EXOC3O60645 756 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 AFAP1L1Q8TED9 768 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 U2AF1L4Q8WU68 220 aaKnown RBP17.83■□□□□ 0.44
VARS2-212ENST00000542001 HAUS4Q9H6D7 363 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 ABCC12Q96J65 1359 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 TDP2O95551 362 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 APBA3O96018 575 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 EIF4A3P38919 411 aaKnown RBP17.83■□□□□ 0.44
VARS2-212ENST00000542001 PFKFB3Q16875 520 aaPredicted RBP17.83■□□□□ 0.44
VARS2-212ENST00000542001 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 SCLT1Q96NL6 688 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 SELENOSQ9BQE4 189 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 NUP58Q9BVL2 599 aa17.83■□□□□ 0.44
VARS2-212ENST00000542001 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms