RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 SZT2Q5T011 3432 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 E7EWF7 191 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 ACTN2P35609 894 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 USP8P40818 1118 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 NDUFA8P51970 172 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 HNRNPH2P55795 449 aaKnown RBP11.74□□□□□ -0.53
CHFR-219ENST00000541341 PICALMQ13492 652 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 ZSCAN26Q16670 478 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 CCDC70Q6NSX1 233 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
CHFR-219ENST00000541341 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 ZNF446Q9NWS9 450 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
CHFR-219ENST00000541341 A0A0U1RQG5 324 aaPredicted RBP11.73□□□□□ -0.53
CHFR-219ENST00000541341 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 SIPA1L1O43166 1804 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 RCAN1P53805 252 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 GNG11P61952 73 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
CHFR-219ENST00000541341 PRKCZQ05513 592 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 SPAG1Q07617 926 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 MOGSQ13724 837 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 DDX60LQ5H9U9 1706 aaKnown RBP11.73□□□□□ -0.53
CHFR-219ENST00000541341 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
CHFR-219ENST00000541341 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 ANKRD23Q86SG2 305 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 ZNF589Q86UQ0 364 aaPredicted RBP11.73□□□□□ -0.53
CHFR-219ENST00000541341 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 STK36Q9NRP7 1315 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
CHFR-219ENST00000541341 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 ADGRA2Q96PE1 1338 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 A0A1B0GVL5 298 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 GOLIM4O00461 696 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 CCL5P13501 91 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 ELNP15502 786 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 PFKFB1P16118 471 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 OAS2P29728 719 aaKnown RBP11.72□□□□□ -0.53
CHFR-219ENST00000541341 GRK4P32298 578 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 NCAPHQ15003 741 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
CHFR-219ENST00000541341 REXO1L1PQ8IX06 675 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 PPM1EQ8WY54 764 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 EDC3Q96F86 508 aaKnown RBP11.72□□□□□ -0.53
CHFR-219ENST00000541341 CARD6Q9BX69 1037 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 RNF208Q9H0X6 261 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 PIH1D3Q9NQM4 214 aaKnown RBP11.72□□□□□ -0.53
CHFR-219ENST00000541341 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 MYH1P12882 1939 aa11.72□□□□□ -0.53
CHFR-219ENST00000541341 CEP290O15078 2479 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 CTAGE9A4FU28 777 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 DDTLA6NHG4 134 aaPredicted RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 TRIM75PA6NK02 468 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 MAP2K7O14733 419 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 CTDNEP1O95476 244 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 NAA30Q147X3 362 aaPredicted RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 KRBA2Q6ZNG9 492 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
CHFR-219ENST00000541341 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 CCDC148Q8NFR7 591 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 ZNF384Q8TF68 577 aa11.71□□□□□ -0.53
CHFR-219ENST00000541341 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms