RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 PDGFCQ9NRA1 345 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
MSRB3-209ENST00000540804 LTBP2Q14767 1821 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 NFIBO00712 420 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 ZNF213O14771 459 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 ICAM1P05362 532 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 ASGR1P07306 291 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 CLTBP09497 229 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 GOLGA8HP0CJ92 632 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 PDHBP11177 359 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 GJA9P57773 515 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
MSRB3-209ENST00000540804 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
MSRB3-209ENST00000540804 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
MSRB3-209ENST00000540804 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
MSRB3-209ENST00000540804 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
MSRB3-209ENST00000540804 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
MSRB3-209ENST00000540804 MTMR10Q9NXD2 777 aa17.04■□□□□ 0.32
MSRB3-209ENST00000540804 MOXD2PA6NHM9 499 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 B4E1Z4 1266 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 KDM4AO75164 1064 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
MSRB3-209ENST00000540804 SMPD1P17405 629 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 CST5P28325 142 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-209ENST00000540804 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
MSRB3-209ENST00000540804 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 GNASQ5JWF2 1037 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 TAPT1Q6NXT6 567 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
MSRB3-209ENST00000540804 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 VTI1AQ96AJ9 217 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 UBA5Q9GZZ9 404 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
MSRB3-209ENST00000540804 ASB14A6NK59 587 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 KIAA0355O15063 1070 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 SNHG28P0DPA3 235 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 GPR153Q6NV75 609 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 ESR2Q92731 530 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 GLT1D1Q96MS3 346 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 TTC14Q96N46 770 aa17.02■□□□□ 0.32
MSRB3-209ENST00000540804 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
MSRB3-209ENST00000540804 COL6A3P12111 3177 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 DYNC1LI2O43237 492 aaPredicted RBP17.01■□□□□ 0.31
MSRB3-209ENST00000540804 RAG1P15918 1043 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 CALML3P27482 149 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 CDK7P50613 346 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 RNF41Q9H4P4 317 aaPredicted RBP17.01■□□□□ 0.31
MSRB3-209ENST00000540804 SPC25Q9HBM1 224 aa17.01■□□□□ 0.31
MSRB3-209ENST00000540804 LAMA2P24043 3122 aaKnown RBP17.01■□□□□ 0.31
MSRB3-209ENST00000540804 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 DCDC2CA8MYV0 355 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
MSRB3-209ENST00000540804 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
MSRB3-209ENST00000540804 USH1GQ495M9 461 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 TLK2Q86UE8 772 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
MSRB3-209ENST00000540804 GUCD1Q96NT3 240 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 ZSWIM5Q9P217 1185 aa17■□□□□ 0.31
MSRB3-209ENST00000540804 PSMC6P62333 389 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 ENAHQ8N8S7 591 aaPredicted RBP16.99■□□□□ 0.31
MSRB3-209ENST00000540804 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 MORC4Q8TE76 937 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 TOX2Q96NM4 488 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 LRRC37A2A6NM11 1700 aa16.99■□□□□ 0.31
MSRB3-209ENST00000540804 MCM3APO60318 1980 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 ELP1O95163 1332 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
MSRB3-209ENST00000540804 ARVCFO00192 962 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 HIP1O00291 1037 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 NKX3-2P78367 333 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 FSCN1Q16658 493 aaKnown RBP16.98■□□□□ 0.31
MSRB3-209ENST00000540804 TTC22Q5TAA0 569 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 RNF207Q6ZRF8 634 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 FAM126BQ8IXS8 530 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 ZSCAN10Q96SZ4 725 aaPredicted RBP16.98■□□□□ 0.31
MSRB3-209ENST00000540804 PPP1R12CQ9BZL4 782 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 LCTP09848 1927 aa16.98■□□□□ 0.31
MSRB3-209ENST00000540804 TNKSO95271 1327 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 RPS6P62753 249 aaKnown RBP16.97■□□□□ 0.31
MSRB3-209ENST00000540804 FPGSQ05932 587 aa16.97■□□□□ 0.31
MSRB3-209ENST00000540804 IMMTQ16891 758 aaKnown RBP16.97■□□□□ 0.31
MSRB3-209ENST00000540804 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms