RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 NDC80O14777 642 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 ODR4Q5SWX8 454 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 PI4K2BQ8TCG2 481 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 IPO4Q8TEX9 1081 aaKnown RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 SECISBP2LQ93073 1101 aaKnown RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 MMS19Q96T76 1030 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.08
USP3-204ENST00000540797 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 GPSM2P81274 684 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 MORC3Q14149 939 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 SLC7A3Q8WY07 619 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 MED10Q9BTT4 135 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 ST7Q9NRC1 585 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 ANKFY1Q9P2R3 1169 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 KCNJ18B7U540 433 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 RPN1P04843 607 aaKnown RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 PPP2R5AQ15172 486 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 STK10O94804 968 aaKnown RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 N4BP1O75113 896 aaKnown RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 TMEM191BP0C7N4 346 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 DLATP10515 647 aaKnown RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 TMED8Q6PL24 325 aaPredicted RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 EEPD1Q7L9B9 569 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 SESTD1Q86VW0 696 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 AKT3Q9Y243 479 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 CPDO75976 1380 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 ZEB2O60315 1214 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 CYP2E1P05181 493 aaPredicted RBP15.57■□□□□ 0.08
USP3-204ENST00000540797 RETREG2Q8NC44 543 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 C1orf112Q9NSG2 853 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 MYO1AQ9UBC5 1043 aa15.57■□□□□ 0.08
USP3-204ENST00000540797 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
USP3-204ENST00000540797 MTX1Q13505 466 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 CFAP58Q5T655 872 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 ZNF365Q70YC5 407 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 SP8Q8IXZ3 490 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 TTC14Q96N46 770 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 SETD1BQ9UPS6 1966 aaKnown RBP15.56■□□□□ 0.08
USP3-204ENST00000540797 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 DYNC1I1O14576 645 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 RFX1P22670 979 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 STAT1P42224 750 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
USP3-204ENST00000540797 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 CCDC127Q96BQ5 260 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 TLDC2A0PJX2 215 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 CROCC2H7BZ55 1655 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
USP3-204ENST00000540797 IFNAR1P17181 557 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 NT5C2P49902 561 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 MAGEF1Q9HAY2 307 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 ADAM9Q13443 819 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 ZNF827Q17R98 1081 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 SPON1Q9HCB6 807 aa15.56■□□□□ 0.08
USP3-204ENST00000540797 LIFRP42702 1097 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 POMGNT1Q8WZA1 660 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 CYP2D6P10635 497 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 TYW1BQ6NUM6 668 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 DGKHQ86XP1 1220 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 LARP4BQ92615 738 aaKnown RBP15.55■□□□□ 0.08
USP3-204ENST00000540797 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.55■□□□□ 0.08
USP3-204ENST00000540797 METTL14Q9HCE5 456 aaKnown RBP15.55■□□□□ 0.08
USP3-204ENST00000540797 QRICH2Q9H0J4 1663 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 NDUFA8P51970 172 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 GBP6Q6ZN66 633 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 GPR161Q8N6U8 529 aaKnown RBP15.55■□□□□ 0.08
USP3-204ENST00000540797 AK8Q96MA6 479 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 RPS6KC1Q96S38 1066 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 WRNIP1Q96S55 665 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 APOL6Q9BWW8 343 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 SLC39A14Q15043 492 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 STIM2Q9P246 746 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
USP3-204ENST00000540797 ZNF445P59923 1031 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 NSMCE1Q8WV22 266 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 GJA10Q969M2 543 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
USP3-204ENST00000540797 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 HNRNPDLO14979 420 aaKnown RBP15.54■□□□□ 0.08
USP3-204ENST00000540797 UBE2SQ16763 222 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
USP3-204ENST00000540797 SMIM5Q71RC9 77 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 SELENOSQ9BQE4 189 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 ZHX2Q9Y6X8 837 aa15.54■□□□□ 0.08
USP3-204ENST00000540797 MADDQ8WXG6 1647 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms