RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TBX2	Q13207	712 aa	Predicted RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IFIT1B	Q5T764	474 aa	Known RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TMEM179	Q6ZVK1	233 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HDX	Q7Z353	690 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ACRBP	Q8NEB7	543 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MAN1B1	Q9UKM7	699 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TJP1	Q07157	1748 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PAPPA	Q13219	1627 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	UNCX	A6NJT0	531 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	USP17L5	A8MUK1	530 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CCDC175	P0C221	793 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KCNA3	P22001	575 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HOXD10	P28358	340 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	INHBE	P58166	350 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	DHX8	Q14562	1220 aa	Known RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	BRD3	Q15059	726 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PTPA	Q15257	358 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SPDYE2	Q495Y8	402 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	USP49	Q70CQ1	688 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FCHSD1	Q86WN1	690 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SLC35F6	Q8N357	371 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NOA1	Q8NC60	698 aa	Known RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MTMR14	Q8NCE2	650 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RIN2	Q8WYP3	895 aa	Predicted RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HPSE	Q9Y251	543 aa		6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TNS1	Q9HBL0	1735 aa	Known RBP	6.37	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	EIF3CL	B5ME19	914 aa	Known RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FOXP2	O15409	715 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KIF5C	O60282	957 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NPM3	O75607	178 aa	Known RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZMYND10	O75800	440 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	COPB2	P35606	906 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZNF280A	P59817	542 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ICA1	Q05084	483 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PPARA	Q07869	468 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PPP2R5B	Q15173	497 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GADL1	Q6ZQY3	521 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IFNL3	Q8IZI9	196 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	VGLL2	Q8N8G2	317 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TMEM87B	Q96K49	555 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	EIF3C	Q99613	913 aa	Known RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PUS7L	Q9H0K6	701 aa	Known RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ADGRG1	Q9Y653	693 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MANSC4	A6NHS7	340 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TMEM88B	A6NKF7	163 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LRRIQ3	A6PVS8	624 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	AKR1B15	C9JRZ8	316 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FDX1	P10109	184 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CDC25A	P30304	524 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	AFM	P43652	599 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SNAPC2	Q13487	334 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CASP8	Q14790	479 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	E2F4	Q16254	413 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	HSP90B2P	Q58FF3	399 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	RESP18	Q5W5W9	173 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MAP1S	Q66K74	1059 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NCAPH2	Q6IBW4	605 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CDC42EP5	Q6NZY7	148 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CMTR1	Q8N1G2	835 aa	Known RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LZTS2	Q9BRK4	669 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CDC23	Q9UJX2	597 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	L1RE1	Q9UN81	338 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	KCNJ14	Q9UNX9	436 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ZNF541	Q9H0D2	1346 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GOLGA6L9	A6NEM1	432 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CETP	P11597	493 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	METAP2	P50579	478 aa	Known RBP eCLIP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TTC31	Q49AM3	519 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	AKNAD1	Q5T1N1	836 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	LRRC31	Q6UY01	552 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PPFIBP1	Q86W92	1011 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MB21D2	Q8IYB1	491 aa	Predicted RBP	6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	JMY	Q8N9B5	988 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	IGSF22	Q8N9C0	903 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	STAM	Q92783	540 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GLT8D2	Q9H1C3	349 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	FAM204A	Q9H8W3	233 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	EFCC1	Q9HA90	598 aa		6.36	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	BTBD18	B2RXH4	712 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	C19orf81	C9J6K1	198 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	APLP1	P51693	650 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	NOG	Q13253	232 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	POSTN	Q15063	836 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ALX1	Q15699	326 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	MAP3K14	Q99558	947 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TANGO6	Q9C0B7	1094 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	TFR2	Q9UP52	801 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	SBF2	Q86WG5	1849 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	UBR2	Q8IWV8	1755 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	WNT10B	O00744	389 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	ENC1	O14682	589 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CTNND1	O60716	968 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CASP14	P31944	242 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CCT6A	P40227	531 aa	Known RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	GTF2A2	P52657	109 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	USP17L2	Q6R6M4	530 aa		6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.35	□□□□□ -1.39
RAPGEF4-215	ENST00000540783	CYB5R4	Q7L1T6	521 aa		6.35	□□□□□ -1.39

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