RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 TRPM7Q96QT4 1865 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L15C9J2P7 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L13C9JLJ4 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L11C9JVI0 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L18D6R9N7 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L22D6RA61 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L17D6RBQ6 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L19D6RCP7 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L20D6RJB6 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 VWA5AO00534 786 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 USP17L24Q0WX57 530 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 UBE2SQ16763 222 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 PROCA1Q8NCQ7 364 aaPredicted RBP25.87■■□□□ 1.73
ARF1-213ENST00000540651 REPS2Q8NFH8 660 aa25.87■■□□□ 1.73
ARF1-213ENST00000540651 ZNF396Q96N95 335 aaPredicted RBP25.87■■□□□ 1.73
ARF1-213ENST00000540651 GADD45BO75293 160 aaPredicted RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 MKRN3Q13064 507 aaKnown RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 COG2Q14746 738 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 TRIM44Q96DX7 344 aaPredicted RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 CLK2P49760 499 aaKnown RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 JAKMIP3Q5VZ66 844 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 USP17L6PQ6QN14 398 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 P2RX7Q99572 595 aaKnown RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 PSTPIP2Q9H939 334 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 RAVER2Q9HCJ3 691 aaKnown RBP25.86■■□□□ 1.73
ARF1-213ENST00000540651 CFAP45Q9UL16 551 aa25.86■■□□□ 1.73
ARF1-213ENST00000540651 SPDYE16A6NNV3 312 aaPredicted RBP25.85■■□□□ 1.73
ARF1-213ENST00000540651 ICAM1P05362 532 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 GPAT2Q6NUI2 795 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 CPXCR1Q8N123 301 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 MS4A4AQ96JQ5 239 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 PGBD1Q96JS3 809 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 POLR3EQ9NVU0 708 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 RCOR1Q9UKL0 485 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 PCDHB6Q9Y5E3 794 aa25.85■■□□□ 1.73
ARF1-213ENST00000540651 MEIS2O14770 477 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 ATP2B1P20020 1258 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 HOXA7P31268 230 aaPredicted RBP25.84■■□□□ 1.73
ARF1-213ENST00000540651 NASPP49321 788 aaPredicted RBP25.84■■□□□ 1.73
ARF1-213ENST00000540651 HUNKP57058 714 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 SF3A1Q15459 793 aaKnown RBP25.84■■□□□ 1.73
ARF1-213ENST00000540651 ANO1Q5XXA6 986 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 ATL3Q6DD88 541 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 REXO1Q8N1G1 1221 aaKnown RBP25.84■■□□□ 1.73
ARF1-213ENST00000540651 TBC1D5Q92609 795 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 SPATA32Q96LK8 384 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 SCAND2PQ9GZW5 306 aaPredicted RBP25.84■■□□□ 1.73
ARF1-213ENST00000540651 RILPL1Q5EBL4 403 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 LINC00301Q8NCQ3 95 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 CUL5Q93034 780 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 PPP1R9BQ96SB3 815 aa25.84■■□□□ 1.73
ARF1-213ENST00000540651 PEX10O60683 326 aa25.83■■□□□ 1.73
ARF1-213ENST00000540651 SNAPC2Q13487 334 aa25.83■■□□□ 1.73
ARF1-213ENST00000540651 PTPAQ15257 358 aa25.83■■□□□ 1.73
ARF1-213ENST00000540651 AGTPBP1Q9UPW5 1226 aa25.83■■□□□ 1.73
ARF1-213ENST00000540651 EDIL3O43854 480 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 SPRYD7Q5W111 196 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 CCPG1Q9ULG6 757 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 RIPK3Q9Y572 518 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 MRPL12P52815 198 aaKnown RBP25.82■■□□□ 1.72
ARF1-213ENST00000540651 TMEM132BQ14DG7 1078 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 INF2Q27J81 1249 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 SAPCD2Q86UD0 394 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 BICD2Q8TD16 824 aa25.82■■□□□ 1.72
ARF1-213ENST00000540651 ZNF214Q9UL59 606 aaPredicted RBP25.82■■□□□ 1.72
ARF1-213ENST00000540651 COL11A1P12107 1806 aaPredicted RBP25.81■■□□□ 1.72
ARF1-213ENST00000540651 CCDC194A0A1B0GVG4 234 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 ZBED4O75132 1171 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 CCDC173Q0VFZ6 552 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 GAS2L3Q86XJ1 694 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 ELP1O95163 1332 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 MYPNQ86TC9 1320 aa25.81■■□□□ 1.72
ARF1-213ENST00000540651 TPRNQ4KMQ1 711 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 SMC1BQ8NDV3 1235 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 CLEC4DQ8WXI8 215 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 ASCC2Q9H1I8 757 aaPredicted RBP25.8■■□□□ 1.72
ARF1-213ENST00000540651 HOXC10Q9NYD6 342 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 MBD3O95983 291 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 FDX1P10109 184 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 TERF1P54274 439 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 FASTKD5Q7L8L6 764 aaKnown RBP25.8■■□□□ 1.72
ARF1-213ENST00000540651 KRT25Q7Z3Z0 450 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 MRVI1Q9Y6F6 885 aa25.8■■□□□ 1.72
ARF1-213ENST00000540651 ABCB11O95342 1321 aa25.79■■□□□ 1.72
ARF1-213ENST00000540651 YEATS4O95619 227 aa25.79■■□□□ 1.72
ARF1-213ENST00000540651 HOXA13P31271 388 aaPredicted RBP25.79■■□□□ 1.72
ARF1-213ENST00000540651 SLC39A14Q15043 492 aa25.79■■□□□ 1.72
ARF1-213ENST00000540651 MUM1L1Q5H9M0 696 aa25.79■■□□□ 1.72
ARF1-213ENST00000540651 BRI3BPQ8WY22 251 aa25.79■■□□□ 1.72
ARF1-213ENST00000540651 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.79■■□□□ 1.72
ARF1-213ENST00000540651 NFIBO00712 420 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 ALAS1P13196 640 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 NONOQ15233 471 aaKnown RBP eCLIP25.78■■□□□ 1.721e-7■■■■□ 24.3
ARF1-213ENST00000540651 TTC38Q5R3I4 469 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 GPT2Q8TD30 523 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 TBCKQ8TEA7 893 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 ZMYND15Q9H091 742 aa25.78■■□□□ 1.72
ARF1-213ENST00000540651 MRPL11Q9Y3B7 192 aaKnown RBP25.78■■□□□ 1.72
ARF1-213ENST00000540651 STK38Q15208 465 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms