RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 EFCAB8A8MWE9 144 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 KRT26Q7Z3Y9 468 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 FBXO33Q7Z6M2 555 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 DDX41Q9UJV9 622 aaKnown RBP11.03□□□□□ -0.64
PHC1-208ENST00000540574 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.64
PHC1-208ENST00000540574 CAPN2P17655 700 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 MRPL12P52815 198 aaKnown RBP11.02□□□□□ -0.64
PHC1-208ENST00000540574 KRT83P78385 493 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 ANKRD7Q92527 254 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 BCCIPQ9P287 314 aaKnown RBP eCLIP11.02□□□□□ -0.64
PHC1-208ENST00000540574 KIAA1024Q9UPX6 916 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 TNS2Q63HR2 1409 aa11.02□□□□□ -0.64
PHC1-208ENST00000540574 KDM3BQ7LBC6 1761 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 H7C1D1 291 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
PHC1-208ENST00000540574 CT47A1Q5JQC4 288 aaPredicted RBP11.02□□□□□ -0.65
PHC1-208ENST00000540574 CNNM4Q6P4Q7 775 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 DGKHQ86XP1 1220 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 REXO1L1PQ8IX06 675 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
PHC1-208ENST00000540574 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.65
PHC1-208ENST00000540574 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 PCDHA1Q9Y5I3 950 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 LRRC37A3O60309 1634 aa11.02□□□□□ -0.65
PHC1-208ENST00000540574 TACC1O75410 805 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 AKR1B1P15121 316 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 MAGEA1P43355 309 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
PHC1-208ENST00000540574 DPYDQ12882 1025 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 STK4Q13043 487 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 GSPT2Q8IYD1 628 aaKnown RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 TAF4BQ92750 862 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 AGPAT5Q9NUQ2 364 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 LEMD3Q9Y2U8 911 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SEMA3EO15041 775 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 FGFR1OPO95684 399 aaKnown RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
PHC1-208ENST00000540574 TICAM2Q86XR7 235 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 CUL5Q93034 780 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 ABHD10Q9NUJ1 306 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SERPINB13Q9UIV8 391 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 MYO6Q9UM54 1294 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 PCDHA6Q9UN73 950 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 PCDHA8Q9Y5H6 950 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SFI1A8K8P3 1242 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 TBCAO75347 108 aaKnown RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 HOXA13P31271 388 aaPredicted RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 NR1I3Q14994 352 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SEPT12Q8IYM1 358 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 SYCP3Q8IZU3 236 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 ALS2CR12Q96Q35 445 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
PHC1-208ENST00000540574 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
PHC1-208ENST00000540574 NDUFA10O95299 355 aa11□□□□□ -0.65
PHC1-208ENST00000540574 GYPCP04921 128 aa11□□□□□ -0.65
PHC1-208ENST00000540574 TAL1P17542 331 aaPredicted RBP11□□□□□ -0.65
PHC1-208ENST00000540574 IL17RBQ9NRM6 502 aa11□□□□□ -0.65
PHC1-208ENST00000540574 DDX25Q9UHL0 483 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 CDC23Q9UJX2 597 aa11□□□□□ -0.65
PHC1-208ENST00000540574 PHLPP2Q6ZVD8 1323 aa11□□□□□ -0.65
PHC1-208ENST00000540574 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
PHC1-208ENST00000540574 TCP10L2B9ZVM9 353 aa11□□□□□ -0.65
PHC1-208ENST00000540574 TUBB4AP04350 444 aa11□□□□□ -0.65
PHC1-208ENST00000540574 LONRF2Q1L5Z9 754 aa11□□□□□ -0.65
PHC1-208ENST00000540574 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
PHC1-208ENST00000540574 GPBP1Q86WP2 473 aa11□□□□□ -0.65
PHC1-208ENST00000540574 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 LARP4BQ92615 738 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 P2RX5Q93086 422 aa11□□□□□ -0.65
PHC1-208ENST00000540574 GBP3Q9H0R5 595 aa11□□□□□ -0.65
PHC1-208ENST00000540574 RSPH14Q9UHP6 348 aa11□□□□□ -0.65
PHC1-208ENST00000540574 RWDD2AQ9UIY3 292 aa11□□□□□ -0.65
PHC1-208ENST00000540574 SAR1BQ9Y6B6 198 aa11□□□□□ -0.65
PHC1-208ENST00000540574 C5P01031 1676 aa11□□□□□ -0.65
PHC1-208ENST00000540574 USP17L10C9JJH3 530 aa11□□□□□ -0.65
PHC1-208ENST00000540574 ABL1P00519 1130 aa11□□□□□ -0.65
PHC1-208ENST00000540574 RASA1P20936 1047 aa11□□□□□ -0.65
PHC1-208ENST00000540574 ATP2B4P23634 1241 aa11□□□□□ -0.65
PHC1-208ENST00000540574 TRAPPC10P48553 1259 aa11□□□□□ -0.65
PHC1-208ENST00000540574 DNM2P50570 870 aa11□□□□□ -0.65
PHC1-208ENST00000540574 DMTNQ08495 405 aa11□□□□□ -0.65
PHC1-208ENST00000540574 KCTD19Q17RG1 926 aaPredicted RBP11□□□□□ -0.65
PHC1-208ENST00000540574 FBXL16Q8N461 479 aa11□□□□□ -0.65
PHC1-208ENST00000540574 SECISBP2LQ93073 1101 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 LUC7LQ9NQ29 371 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
PHC1-208ENST00000540574 PARP3Q9Y6F1 533 aa11□□□□□ -0.65
PHC1-208ENST00000540574 A0A1B0GTH6 734 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms