RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 TRIM58Q8NG06 486 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 TUBGCP2Q9BSJ2 902 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 DEF6Q9H4E7 631 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.4
CPT1A-206ENST00000540367 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
CPT1A-206ENST00000540367 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 ERLIN2O94905 339 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 RHOBTB3O94955 611 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 MYL1P05976 194 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 SKIDA1Q1XH10 827 aa12.52□□□□□ -0.41
CPT1A-206ENST00000540367 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
CPT1A-206ENST00000540367 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.41
CPT1A-206ENST00000540367 A0A1W2PQJ5 194 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 KCNQ2O43526 872 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 OPA1O60313 960 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 FIGNQ5HY92 759 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 TACC1O75410 805 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 FGRP09769 529 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 PRLRP16471 622 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 KLK7P49862 253 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 EPHB4P54760 987 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 GNGT1P63211 74 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 CYP27A1Q02318 531 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 TBC1D8BQ0IIM8 1120 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 LRRC1Q9BTT6 524 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
CPT1A-206ENST00000540367 SLIT2O94813 1529 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
CPT1A-206ENST00000540367 ZNF263O14978 683 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 TOM1O60784 492 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 LIG3P49916 1009 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SPA17Q15506 151 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 HDAC7Q8WUI4 952 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 KAT2BQ92831 832 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 EHD4Q9H223 541 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 ABCF2Q9UG63 623 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CALML3P27482 149 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SKOR1P84550 965 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CCDC96Q2M329 555 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 MCTP2Q6DN12 878 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 FAM114A1Q8IWE2 563 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 ERGIC2Q96RQ1 377 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 BRIP1Q9BX63 1249 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 SH2D4AQ9H788 454 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 KBTBD4Q9NVX7 518 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 JAG2Q9Y219 1238 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
CPT1A-206ENST00000540367 BAZ2BQ9UIF8 2168 aaKnown RBP12.5□□□□□ -0.41
CPT1A-206ENST00000540367 A6NNZ2 444 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 ALS2CLQ60I27 953 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 ZNF34Q8IZ26 560 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
CPT1A-206ENST00000540367 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 ATXN2Q99700 1313 aaKnown RBP12.49□□□□□ -0.41
CPT1A-206ENST00000540367 COL4A1P02462 1669 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 A0A1B0GUL6 1792 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 MYH1P12882 1939 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 BICDL2A1A5D9 508 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 ERVV-1B6SEH8 477 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
CPT1A-206ENST00000540367 CCNE1P24864 410 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
CPT1A-206ENST00000540367 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 MIIPQ5JXC2 388 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 DTHD1Q6ZMT9 781 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
CPT1A-206ENST00000540367 ZSCAN29Q8IWY8 852 aaPredicted RBP12.49□□□□□ -0.41
CPT1A-206ENST00000540367 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 823 ms