RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
SSPN-207ENST00000540266 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
SSPN-207ENST00000540266 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
SSPN-207ENST00000540266 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
SSPN-207ENST00000540266 SMPD1P17405 629 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 ICA1Q05084 483 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 GPNMBQ14956 572 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 SNRNP48Q6IEG0 339 aaKnown RBP12.55□□□□□ -0.4
SSPN-207ENST00000540266 TMCO2Q7Z6W1 182 aaPredicted RBP12.55□□□□□ -0.4
SSPN-207ENST00000540266 TLK2Q86UE8 772 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 TGS1Q96RS0 853 aaKnown RBP12.55□□□□□ -0.4
SSPN-207ENST00000540266 MEIS3Q99687 375 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 Q9Y3F1 56 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 TNKSO95271 1327 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 FOCADQ5VW36 1801 aa12.55□□□□□ -0.4
SSPN-207ENST00000540266 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
SSPN-207ENST00000540266 DMDP11532 3685 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 LINC01553A4QN01 128 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
SSPN-207ENST00000540266 ZEB2O60315 1214 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 ABCB7O75027 752 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 AKR1B1P15121 316 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 WDR5P61964 334 aaKnown RBP12.54□□□□□ -0.4
SSPN-207ENST00000540266 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 PABPC5Q96DU9 382 aaKnown RBP12.54□□□□□ -0.4
SSPN-207ENST00000540266 RAD9AQ99638 391 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
SSPN-207ENST00000540266 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 GJB5O95377 273 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
SSPN-207ENST00000540266 CCDC158Q5M9N0 1113 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
SSPN-207ENST00000540266 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
SSPN-207ENST00000540266 RNF135Q8IUD6 432 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSPN-207ENST00000540266 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 MRPL38Q96DV4 380 aaKnown RBP12.53□□□□□ -0.4
SSPN-207ENST00000540266 FTOQ9C0B1 505 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSPN-207ENST00000540266 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 GPR108Q9NPR9 543 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 TECTAO75443 2155 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
SSPN-207ENST00000540266 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 M0R296 226 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
SSPN-207ENST00000540266 LTBRP36941 435 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 CNTN2Q02246 1040 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 SMAD2Q15796 467 aaKnown RBP12.52□□□□□ -0.41
SSPN-207ENST00000540266 FAM83BQ5T0W9 1011 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 DYNLL2Q96FJ2 89 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 SLF1Q9BQI6 1058 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 MCM9Q9NXL9 1143 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 SWAP70Q9UH65 585 aa12.52□□□□□ -0.41
SSPN-207ENST00000540266 CYP2D6P10635 497 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 KCNJ6P48051 423 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 DEFB103AP81534 67 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
SSPN-207ENST00000540266 TNNI3KQ59H18 835 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 KANSL2Q9H9L4 492 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
SSPN-207ENST00000540266 PDGFCQ9NRA1 345 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 FPGT-TNNI3KV9GXZ4 949 aa12.51□□□□□ -0.41
SSPN-207ENST00000540266 RIF1Q5UIP0 2472 aaKnown RBP12.5□□□□□ -0.41
SSPN-207ENST00000540266 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
SSPN-207ENST00000540266 CTC1Q2NKJ3 1217 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 ASCL5Q7RTU5 278 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 PRPF38AQ8NAV1 312 aaKnown RBP12.5□□□□□ -0.41
SSPN-207ENST00000540266 RETREG2Q8NC44 543 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 C17orf80Q9BSJ5 609 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 IRF2BPLQ9H1B7 796 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
SSPN-207ENST00000540266 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 COL4A4P53420 1690 aaPredicted RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
SSPN-207ENST00000540266 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
SSPN-207ENST00000540266 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms