RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ADGRE1Q14246 886 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 FSCN1Q16658 493 aaKnown RBP23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 PPM1EQ8WY54 764 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 TRERF1Q96PN7 1200 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 NACAP1Q9BZK3 213 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 HIPK3Q9H422 1215 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 GRIN2DO15399 1336 aa23.73■■□□□ 1.39
LPCAT3-210ENST00000540090 MCM3APO60318 1980 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 CHD9Q3L8U1 2897 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 SMPD1P17405 629 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 SLC1A4P43007 532 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 LRRFIP1Q32MZ4 808 aaKnown RBP23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 C20orf194Q5TEA3 1177 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 TLK2Q86UE8 772 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 AP5M1Q9H0R1 490 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 MTIF3Q9H2K0 278 aaKnown RBP23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 RCAN3Q9UKA8 241 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 Q9Y3F1 56 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 MYO9BQ13459 2157 aa23.72■■□□□ 1.39
LPCAT3-210ENST00000540090 DYNC1LI2O43237 492 aaPredicted RBP23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 ZEB2O60315 1214 aa23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 SLC3A2P08195 630 aaKnown RBP23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 MCCP23508 829 aa23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 IQSEC1Q6DN90 963 aa23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 ASB2Q96Q27 587 aa23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 ISY1Q9ULR0 285 aaKnown RBP23.71■■□□□ 1.39
LPCAT3-210ENST00000540090 UMODL1Q5DID0 1318 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 ALAS1P13196 640 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 PPARAQ07869 468 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 TAPT1Q6NXT6 567 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 SEC62Q99442 399 aaKnown RBP23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 PDGFCQ9NRA1 345 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 THEGQ9P2T0 379 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 MYH4Q9Y623 1939 aa23.7■■□□□ 1.38
LPCAT3-210ENST00000540090 PTGS1P23219 599 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 IKQ13123 557 aaPredicted RBP23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 PPP4R3BQ5MIZ7 849 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 RCSD1Q6JBY9 416 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 OTOP2Q7RTS6 562 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 NOC4LQ9BVI4 516 aaKnown RBP23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 NAPBQ9H115 298 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 TRPV6Q9H1D0 765 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 NKX2-4Q9H2Z4 354 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 SLC28A3Q9HAS3 691 aa23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 YBX2Q9Y2T7 364 aaKnown RBP23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 DDX49Q9Y6V7 483 aaKnown RBP23.69■■□□□ 1.38
LPCAT3-210ENST00000540090 B4GALT4O60513 344 aa23.68■■□□□ 1.38
LPCAT3-210ENST00000540090 CCL23P55773 120 aa23.68■■□□□ 1.38
LPCAT3-210ENST00000540090 KCTD1Q719H9 257 aa23.68■■□□□ 1.38
LPCAT3-210ENST00000540090 CYP39A1Q9NYL5 469 aa23.68■■□□□ 1.38
LPCAT3-210ENST00000540090 IGFBP4P22692 258 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 MRPS5P82675 430 aaKnown RBP23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 CCDC85BQ15834 202 aaPredicted RBP23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 MUM1L1Q5H9M0 696 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 TMEM63BQ5T3F8 832 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 RPUSD2Q8IZ73 545 aaKnown RBP23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 MORC4Q8TE76 937 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 CHMP4CQ96CF2 233 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 WNT8AQ9H1J5 351 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 IL17RBQ9NRM6 502 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 PRR12Q9ULL5 1215 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 CHD7Q9P2D1 2997 aa23.67■■□□□ 1.38
LPCAT3-210ENST00000540090 SNAP25P60880 206 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 PSMC6P62333 389 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 ZMYM1Q5SVZ6 1142 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 EEPD1Q7L9B9 569 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 FBXO16Q8IX29 292 aaPredicted RBP23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 VWCEQ96DN2 955 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 VTA1Q9NP79 307 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 STX8Q9UNK0 236 aa23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.66■■□□□ 1.38
LPCAT3-210ENST00000540090 TTC41PQ6P2S7 1318 aa23.65■■□□□ 1.38
LPCAT3-210ENST00000540090 KIAA1211Q6ZU35 1233 aa23.65■■□□□ 1.38
LPCAT3-210ENST00000540090 SLC4A7Q9Y6M7 1214 aa23.65■■□□□ 1.38
LPCAT3-210ENST00000540090 COL9A1P20849 921 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 NOVP48745 357 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 RABGGTBP53611 331 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 PI4K2BQ8TCG2 481 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 ADAMTS19Q8TE59 1207 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 PURBQ96QR8 312 aaKnown RBP23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 ALDH8A1Q9H2A2 487 aaPredicted RBP23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 INCENPQ9NQS7 918 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 CCPG1Q9ULG6 757 aa23.64■■□□□ 1.37
LPCAT3-210ENST00000540090 TSPY2A6NKD2 308 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 ERC2O15083 957 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 NMT2O60551 498 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 ICAM1P05362 532 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 DUSP28Q4G0W2 176 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 PCDHA11Q9Y5I1 949 aa23.63■■□□□ 1.37
LPCAT3-210ENST00000540090 FOXP2O15409 715 aa23.62■■□□□ 1.37
LPCAT3-210ENST00000540090 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
LPCAT3-210ENST00000540090 SCLYQ96I15 445 aa23.62■■□□□ 1.37
LPCAT3-210ENST00000540090 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
LPCAT3-210ENST00000540090 SUPT20HL2P0C7V6 817 aa23.61■■□□□ 1.37
LPCAT3-210ENST00000540090 MYOGP15173 224 aa23.61■■□□□ 1.37
LPCAT3-210ENST00000540090 CTDSPL2Q05D32 466 aa23.61■■□□□ 1.37
LPCAT3-210ENST00000540090 BAATQ14032 418 aaPredicted RBP23.61■■□□□ 1.37
LPCAT3-210ENST00000540090 PPP2R2DQ66LE6 453 aa23.61■■□□□ 1.37
LPCAT3-210ENST00000540090 RASGRP2Q7LDG7 609 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms