RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FGD1P98174 961 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 APOBRQ0VD83 1088 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 GRB14Q14449 540 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PKN2Q16513 984 aaKnown RBP8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CDC37Q16543 378 aaPredicted RBP8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 MORN1Q5T089 497 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 IFFO2Q5TF58 517 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PLEKHH3Q7Z736 793 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 RAB11FIP4Q86YS3 637 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CPXCR1Q8N123 301 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 SOCS4Q8WXH5 440 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 USP6NLQ92738 828 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 COA7Q96BR5 231 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 MTMR8Q96EF0 704 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 KIF2CQ99661 725 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 SPZ1Q9BXG8 430 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 MCOLN1Q9GZU1 580 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 MROH8Q9H579 483 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 RIOX1Q9H6W3 641 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 JMJD4Q9H9V9 463 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 GJD2Q9UKL4 321 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 GABRQQ9UN88 632 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 HPS5Q9UPZ3 1129 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PTPN22Q9Y2R2 807 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CTDP1Q9Y5B0 961 aaPredicted RBP8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PTCH2Q9Y6C5 1203 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CNTNAP5Q8WYK1 1306 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 SLC15A5A6NIM6 579 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 PTPREP23469 700 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 HOXD10P28358 340 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 FLT3LGP49771 235 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 IRF5Q13568 498 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 QRICH1Q2TAL8 776 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 TKFCQ3LXA3 575 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 WDR78Q5VTH9 848 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 FBXO46Q6PJ61 603 aaPredicted RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 TMTC3Q6ZXV5 915 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 ABRAQ8N0Z2 381 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 FANCBQ8NB91 859 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 TBC1D32Q96NH3 1257 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 APBA2Q99767 749 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 ALDH8A1Q9H2A2 487 aaPredicted RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 UPF2Q9HAU5 1272 aaKnown RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 CWC22Q9HCG8 908 aaKnown RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 RNF146Q9NTX7 359 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 PDRG1Q9NUG6 133 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 CCPG1Q9ULG6 757 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 KIAA1217Q5T5P2 1943 aa8.11□□□□□ -1.11
LPCAT3-209ENST00000540060 ZBTB5O15062 677 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 STRNO43815 780 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 PPP1R11O60927 126 aaPredicted RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 HOXC6P09630 235 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 FCER1AP12319 257 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 ALAS1P13196 640 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 SMARCA1P28370 1054 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 ADORA2AP29274 412 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 PDIA3P30101 505 aaKnown RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 CDC27P30260 824 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 GNAQP50148 359 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 AK2P54819 239 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 FUT2Q10981 343 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 MAP2K5Q13163 448 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 RTN1Q16799 776 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 USH1GQ495M9 461 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 MUM1L1Q5H9M0 696 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 HOMER1Q86YM7 354 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 CMTR1Q8N1G2 835 aaKnown RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 SRBD1Q8N5C6 995 aaKnown RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 CHST13Q8NET6 341 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 PIGSQ96S52 555 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 MMP19Q99542 508 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 NUDT12Q9BQG2 462 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 LZTS2Q9BRK4 669 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 FAM217BQ9NTX9 383 aaPredicted RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 PNMA2Q9UL42 364 aa8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 MKI67P46013 3256 aaKnown RBP8.1□□□□□ -1.11
LPCAT3-209ENST00000540060 PFASO15067 1338 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 ABCB11O95342 1321 aa8.09□□□□□ -1.11
LPCAT3-209ENST00000540060 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms