RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SCRN1Q12765 414 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 GCKRQ14397 625 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 ARID5BQ14865 1188 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 NCAPHQ15003 741 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 RSRC2Q7L4I2 434 aaKnown RBP8.71□□□□□ -1.02
CCDC60-204ENST00000539847 UBE3BQ7Z3V4 1068 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF804AQ7Z570 1209 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 FAM160A2Q8N612 972 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-204ENST00000539847 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 LINC00301Q8NCQ3 95 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 FBXO18Q8NFZ0 1043 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 GOLGA5Q8TBA6 731 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 USP28Q96RU2 1077 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 HAUS7Q99871 368 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 MXD3Q9BW11 206 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 GOLPH3LQ9H4A5 285 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 GPR108Q9NPR9 543 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 IGSF5Q9NSI5 407 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 FEZ2Q9UHY8 353 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-204ENST00000539847 PCDHA7Q9UN72 937 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 PTPN22Q9Y2R2 807 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 IRS2Q9Y4H2 1338 aa8.71□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 CCDC151A5D8V7 595 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 WTIPA6NIX2 430 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 STX10O60499 249 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 JAK2O60674 1132 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 CAPN2P17655 700 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 CTHP32929 405 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 ME1P48163 572 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 FANCCQ00597 558 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 SP3Q02447 781 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 CHRNDQ07001 517 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 PTPRNQ16849 979 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 TMC6Q7Z403 805 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 XPO4Q9C0E2 1151 aaKnown RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 YY1AP1Q9H869 796 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 ARFGAP3Q9NP61 516 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 ZCCHC17Q9NP64 241 aaKnown RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 IFNKQ9P0W0 207 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 SCAF8Q9UPN6 1271 aaKnown RBP8.7□□□□□ -1.02
CCDC60-204ENST00000539847 MYH3P11055 1940 aa8.7□□□□□ -1.02
CCDC60-204ENST00000539847 SSC5DA1L4H1 1573 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 ANKRD18BA2A2Z9 1011 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 USP17L5A8MUK1 530 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 MAP2K7O14733 419 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 PPP6R2O75170 966 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 WDHD1O75717 1129 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CTDNEP1O95476 244 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 GNRH1P01148 92 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 SKIP12755 728 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 USP5P45974 858 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 TBX2Q13207 712 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CRHR2Q13324 411 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 SMC1AQ14683 1233 aaKnown RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CWF19L2Q2TBE0 894 aaKnown RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CC2D1AQ6P1N0 951 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 HOMER1Q86YM7 354 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CERS5Q8N5B7 392 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 CLMNQ96JQ2 1002 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-204ENST00000539847 FAM205AQ6ZU69 1335 aa8.69□□□□□ -1.02
CCDC60-204ENST00000539847 TRIOBPQ9H2D6 2365 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 SPTLC2O15270 562 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 USP2O75604 605 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF202O95125 648 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 SMC2O95347 1197 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 CYP21A2P08686 494 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 KLRK1P26718 216 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 PDIA3P30101 505 aaKnown RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 CASQ1P31415 396 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 TXLNAP40222 546 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 GTF2A2P52657 109 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 PRMT2P55345 433 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 COPS2P61201 443 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 MYL5Q02045 173 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 IFIT5Q13325 482 aaKnown RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 PRKG1Q13976 671 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 SF3A1Q15459 793 aaKnown RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 RABL6Q3YEC7 729 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 CFAP100Q494V2 611 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF589Q86UQ0 364 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 KBTBD3Q8NAB2 608 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 SUCLG2Q96I99 432 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
CCDC60-204ENST00000539847 NAA15Q9BXJ9 866 aaKnown RBP8.68□□□□□ -1.02
CCDC60-204ENST00000539847 FUT8Q9BYC5 575 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms