RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MARCH6O60337 910 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 DSG3P32926 999 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 PRPHP41219 470 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 SLC39A14Q15043 492 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 PWP2Q15269 919 aaKnown RBP13.43□□□□□ -0.26
VTN-202ENST00000539746 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 PRAMEF18Q5VWM3 479 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 KRI1Q8N9T8 703 aaKnown RBP13.43□□□□□ -0.26
VTN-202ENST00000539746 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
VTN-202ENST00000539746 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 GPKOWQ92917 476 aaPredicted RBP eCLIP13.43□□□□□ -0.26
VTN-202ENST00000539746 TCEAL9Q9UHQ7 104 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 KCNJ14Q9UNX9 436 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
VTN-202ENST00000539746 VWA5AO00534 786 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 CTAGE5O15320 804 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 CUTAO60888 179 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 STAM2O75886 525 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 TOMM70O94826 608 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 FOSBP53539 338 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 ADALQ6DHV7 355 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 TTBK2Q6IQ55 1244 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 PIK3AP1Q6ZUJ8 805 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 KCTD17Q8N5Z5 321 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 AK8Q96MA6 479 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 PARK7Q99497 189 aaKnown RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
VTN-202ENST00000539746 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
VTN-202ENST00000539746 JAG1P78504 1218 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 SETQ01105 290 aaPredicted RBP13.41□□□□□ -0.26
VTN-202ENST00000539746 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 ANKRD23Q86SG2 305 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 LINC00301Q8NCQ3 95 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
VTN-202ENST00000539746 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
VTN-202ENST00000539746 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 ADAMTS5Q9UNA0 930 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
VTN-202ENST00000539746 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 IRF6O14896 467 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 TBX3O15119 743 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 TRAK2O60296 914 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 NEMFO60524 1076 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 KINO60870 393 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 ALDH1A1P00352 501 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 LONP1P36776 959 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 HUNKP57058 714 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 GHRHRQ02643 423 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 USH1GQ495M9 461 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 CDHR1Q96JP9 859 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 MROH8Q9H579 483 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 SLC5A4Q9NY91 659 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
VTN-202ENST00000539746 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
VTN-202ENST00000539746 MYH6P13533 1939 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 hCG_1642624A0A1W2PR95 340 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 ZNF76P36508 570 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 STAT3P40763 770 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
VTN-202ENST00000539746 COA7Q96BR5 231 aa13.39□□□□□ -0.27
VTN-202ENST00000539746 TMEM88BA6NKF7 163 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 M0R2N6 131 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 MAFGO15525 162 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 CCNT1O60563 726 aaKnown RBP13.38□□□□□ -0.27
VTN-202ENST00000539746 CAVIN2O95810 425 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 CMA1P23946 247 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
VTN-202ENST00000539746 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
VTN-202ENST00000539746 NR5A1Q13285 461 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 SNRNP48Q6IEG0 339 aaKnown RBP13.38□□□□□ -0.27
VTN-202ENST00000539746 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 NIPA1Q7RTP0 329 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 DNERQ8NFT8 737 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 TNFRSF25Q93038 417 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
VTN-202ENST00000539746 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms