RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ALG1Q9BT22 464 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 MOV10L1Q9BXT6 1211 aaKnown RBP17.78■□□□□ 0.44
DDB1-216ENST00000539739 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
DDB1-216ENST00000539739 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 FBXO40Q9UH90 709 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
DDB1-216ENST00000539739 DTNBO60941 627 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 FDPSP14324 419 aaKnown RBP17.77■□□□□ 0.44
DDB1-216ENST00000539739 GJB2P29033 226 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 NAPAP54920 295 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 WWC2Q6AWC2 1192 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 SHCBP1Q8NEM2 672 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 CHST13Q8NET6 341 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 GPKOWQ92917 476 aaPredicted RBP eCLIP17.77■□□□□ 0.44
DDB1-216ENST00000539739 R3HDMLQ9H3Y0 253 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 MROH8Q9H579 483 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 HOMER2Q9NSB8 354 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
DDB1-216ENST00000539739 ERCC3P19447 782 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 PPP1R18Q6NYC8 613 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 CCDC148Q8NFR7 591 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 ACAD9Q9H845 621 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 SH3GLB2Q9NR46 395 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 RNF146Q9NTX7 359 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
DDB1-216ENST00000539739 STXBP3O00186 592 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 MAPK4P31152 587 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 TRIM29Q14134 588 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 MCF2L2Q86YR7 1114 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
DDB1-216ENST00000539739 JMYQ8N9B5 988 aa17.76■□□□□ 0.43
DDB1-216ENST00000539739 MYH6P13533 1939 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 SP3Q02447 781 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 KIF22Q14807 665 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 PORCNQ9H237 461 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
DDB1-216ENST00000539739 GPR25O00155 361 aa17.74■□□□□ 0.43
DDB1-216ENST00000539739 TAL1P17542 331 aaPredicted RBP17.74■□□□□ 0.43
DDB1-216ENST00000539739 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
DDB1-216ENST00000539739 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
DDB1-216ENST00000539739 EFCC1Q9HA90 598 aa17.74■□□□□ 0.43
DDB1-216ENST00000539739 IVNS1ABPQ9Y6Y0 642 aa17.74■□□□□ 0.43
DDB1-216ENST00000539739 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 PDCP20941 246 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 GNA11P29992 359 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 NLRP5P59047 1200 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 MUM1L1Q5H9M0 696 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 SAMD3Q8N6K7 520 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 MAF1Q9H063 256 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 PSTPIP2Q9H939 334 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 C6orf50Q9HD87 102 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 CEP350Q5VT06 3117 aa17.73■□□□□ 0.43
DDB1-216ENST00000539739 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 STRNO43815 780 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 CALML3P27482 149 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
DDB1-216ENST00000539739 NBR1Q14596 966 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 PLEKHH3Q7Z736 793 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 RGS22Q8NE09 1264 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 CUL5Q93034 780 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 ZMYND12Q9H0C1 365 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 NFIBO00712 420 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 FKTNO75072 461 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 FCER1AP12319 257 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 ADCY7P51828 1080 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 FOSBP53539 338 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 FCGRTP55899 365 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
DDB1-216ENST00000539739 KCTD2Q14681 263 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
DDB1-216ENST00000539739 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDB1-216ENST00000539739 GPR142Q7Z601 462 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 TEX2Q8IWB9 1127 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
DDB1-216ENST00000539739 MMP19Q99542 508 aa17.72■□□□□ 0.43
DDB1-216ENST00000539739 MAP3K20Q9NYL2 800 aaKnown RBP17.72■□□□□ 0.43
DDB1-216ENST00000539739 PFASO15067 1338 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
DDB1-216ENST00000539739 CFBP00751 764 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 POLR2MP0CAP2 368 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 PSMC4P43686 418 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 RNF207Q6ZRF8 634 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 BRMS1Q9HCU9 246 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 RIC8AQ9NPQ8 531 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
DDB1-216ENST00000539739 PCNTO95613 3336 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms