RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 WNT8AQ9H1J5 351 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 MTMR7Q9Y216 660 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 ELP1O95163 1332 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 RFXAPO00287 272 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 GPAA1O43292 621 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 CD4P01730 458 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 TDO2P48775 406 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 MUM1L1Q5H9M0 696 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 SLFN13Q68D06 897 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 FBXO16Q8IX29 292 aaPredicted RBP17.75■□□□□ 0.43
USB1-203ENST00000539737 MSL3Q8N5Y2 521 aaKnown RBP17.75■□□□□ 0.43
USB1-203ENST00000539737 PI4K2BQ8TCG2 481 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
USB1-203ENST00000539737 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
USB1-203ENST00000539737 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
USB1-203ENST00000539737 A1CFQ9NQ94 594 aaKnown RBP17.75■□□□□ 0.43
USB1-203ENST00000539737 ZNF536O15090 1300 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 TMEM232C9JQI7 657 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 SMPD1P17405 629 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 TFF2Q03403 129 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 ZNF467Q7Z7K2 595 aaPredicted RBP17.74■□□□□ 0.43
USB1-203ENST00000539737 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 FAM133AQ8N9E0 248 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 PCSK9Q8NBP7 692 aaKnown RBP17.74■□□□□ 0.43
USB1-203ENST00000539737 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 RNF146Q9NTX7 359 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 MTMR4Q9NYA4 1195 aa17.74■□□□□ 0.43
USB1-203ENST00000539737 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 B4GALT4O60513 344 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 NMT2O60551 498 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 APPP05067 770 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 PDE1AP54750 535 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 KRT40Q6A162 431 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 KBTBD3Q8NAB2 608 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
USB1-203ENST00000539737 GNEQ9Y223 722 aaKnown RBP17.73■□□□□ 0.43
USB1-203ENST00000539737 DYNC1LI2O43237 492 aaPredicted RBP17.72■□□□□ 0.43
USB1-203ENST00000539737 ARHGEF15O94989 841 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 BMP3P12645 472 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 ALAS1P13196 640 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 MCCP23508 829 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
USB1-203ENST00000539737 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
USB1-203ENST00000539737 HERVK_113Q902F9 699 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 APPBP2Q92624 585 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 ASB2Q96Q27 587 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 SPC25Q9HBM1 224 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 FEM1BQ9UK73 627 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
USB1-203ENST00000539737 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
USB1-203ENST00000539737 TLR3O15455 904 aaKnown RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 CYP2C9P11712 490 aa17.71■□□□□ 0.43
USB1-203ENST00000539737 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 ITGA7Q13683 1181 aa17.71■□□□□ 0.43
USB1-203ENST00000539737 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 SPRED2Q7Z698 418 aa17.71■□□□□ 0.43
USB1-203ENST00000539737 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
USB1-203ENST00000539737 UHRF1Q96T88 793 aaPredicted RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 ACAD9Q9H845 621 aa17.71■□□□□ 0.43
USB1-203ENST00000539737 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
USB1-203ENST00000539737 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 ZBBXA8MT70 800 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TTLL1O95922 423 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 FGBP02675 491 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 KCNQ1P51787 676 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TFAP4Q01664 338 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TAPT1Q6NXT6 567 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 SLC43A3Q8NBI5 491 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 MKL1Q969V6 931 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 MSRAQ9UJ68 235 aa17.7■□□□□ 0.42
USB1-203ENST00000539737 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
USB1-203ENST00000539737 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 FSD1Q9BTV5 496 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
USB1-203ENST00000539737 FOXP2O15409 715 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 GNAT2P19087 354 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 RAB30Q15771 203 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 PPP2R2DQ66LE6 453 aa17.68■□□□□ 0.42
USB1-203ENST00000539737 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms