RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 IL9P15248 144 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 KCNJ6P48051 423 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
YBX3-207ENST00000539204 PUS10Q3MIT2 529 aaKnown RBP14.47□□□□□ -0.09
YBX3-207ENST00000539204 PTCRAQ6ISU1 281 aaPredicted RBP14.47□□□□□ -0.09
YBX3-207ENST00000539204 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 C16orf86Q6ZW13 317 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 TRMT2AQ8IZ69 625 aaKnown RBP14.47□□□□□ -0.09
YBX3-207ENST00000539204 KIFC2Q96AC6 838 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 ZBED2Q9BTP6 218 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 ARMT1Q9H993 441 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 SLC38A10Q9HBR0 1119 aa14.47□□□□□ -0.09
YBX3-207ENST00000539204 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 USP17L12C9JPN9 530 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 USP17L21D6R901 530 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 PRKAB2O43741 272 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 BAIAP3O94812 1187 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 IQCF3P0C7M6 154 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 FAM133AQ8N9E0 248 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 GDPD5Q8WTR4 605 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 DDRGK1Q96HY6 314 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 MFSD14AQ96MC6 490 aa14.46□□□□□ -0.09
YBX3-207ENST00000539204 GRXCR2A6NFK2 248 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 PTGS1P23219 599 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 OAZ1P54368 228 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 SUGCTQ9HAC7 445 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 GPHNQ9NQX3 736 aaPredicted RBP14.45□□□□□ -0.1
YBX3-207ENST00000539204 PDGFCQ9NRA1 345 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 HOMER2Q9NSB8 354 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 POLR3EQ9NVU0 708 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 FEM1BQ9UK73 627 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 COG6Q9Y2V7 657 aa14.45□□□□□ -0.1
YBX3-207ENST00000539204 MCM3APO60318 1980 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 TCRBV5S4A2TA0A5A2 114 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 LCHNA4D1U4 455 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 SOWAHBA6NEL2 793 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 ST18O60284 1047 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 NDUFB10O96000 172 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 TRIM27P14373 513 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 TAPT1Q6NXT6 567 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 KIAA1211Q6ZU35 1233 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 EEPD1Q7L9B9 569 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 AACSQ86V21 672 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.44□□□□□ -0.1
YBX3-207ENST00000539204 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.44□□□□□ -0.1
YBX3-207ENST00000539204 ACAD9Q9H845 621 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 MTUS1Q9ULD2 1270 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 USP34Q70CQ2 3546 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 NAV1Q8NEY1 1877 aa14.44□□□□□ -0.1
YBX3-207ENST00000539204 BFSP2Q13515 415 aa14.43□□□□□ -0.1
YBX3-207ENST00000539204 FAM47CQ5HY64 1035 aa14.43□□□□□ -0.1
YBX3-207ENST00000539204 TMEM63BQ5T3F8 832 aa14.43□□□□□ -0.1
YBX3-207ENST00000539204 HFE2Q6ZVN8 426 aa14.43□□□□□ -0.1
YBX3-207ENST00000539204 TGS1Q96RS0 853 aaKnown RBP14.43□□□□□ -0.1
YBX3-207ENST00000539204 GOLIM4O00461 696 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 MBD4O95243 580 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 MYL3P08590 195 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 FDX1P10109 184 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 ERVK-21P61565 698 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 PURAQ00577 322 aaKnown RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 NBPF20Q3BBV1 942 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 DUSP28Q4G0W2 176 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 FBXO16Q8IX29 292 aaPredicted RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 FRAT1Q92837 279 aaPredicted RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 CLUAP1Q96AJ1 413 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 RAD9AQ99638 391 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 MTG1Q9BT17 334 aaPredicted RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 MKNK2Q9HBH9 465 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 A1CFQ9NQ94 594 aaKnown RBP14.42□□□□□ -0.1
YBX3-207ENST00000539204 CLIP2Q9UDT6 1046 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 FAM50BQ9Y247 325 aa14.42□□□□□ -0.1
YBX3-207ENST00000539204 CPT1AP50416 773 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 FOXK2Q01167 660 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 LRRFIP1Q32MZ4 808 aaKnown RBP14.41□□□□□ -0.1
YBX3-207ENST00000539204 BRDTQ58F21 947 aaPredicted RBP14.41□□□□□ -0.1
YBX3-207ENST00000539204 CTR9Q6PD62 1173 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 TMCO2Q7Z6W1 182 aaPredicted RBP14.41□□□□□ -0.1
YBX3-207ENST00000539204 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 CRBNQ96SW2 442 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 PHOX2BQ99453 314 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 VTA1Q9NP79 307 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 PRKAG3Q9UGI9 489 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 CTNNA3Q9UI47 895 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 NOD1Q9Y239 953 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 MYH8P13535 1937 aa14.41□□□□□ -0.1
YBX3-207ENST00000539204 H3BQ06 376 aaPredicted RBP14.4□□□□□ -0.1
YBX3-207ENST00000539204 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
YBX3-207ENST00000539204 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
YBX3-207ENST00000539204 NFRKBQ6P4R8 1299 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 MKL1Q969V6 931 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 DNAJC2Q99543 621 aaKnown RBP14.4□□□□□ -0.1
YBX3-207ENST00000539204 WDR11Q9BZH6 1224 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 RNF146Q9NTX7 359 aa14.4□□□□□ -0.1
YBX3-207ENST00000539204 TNNQ9UQP3 1299 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms