RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
PBX3-212ENST00000538998 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 Q9Y3F1 56 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 CHD7Q9P2D1 2997 aa16.84■□□□□ 0.29
PBX3-212ENST00000538998 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
PBX3-212ENST00000538998 NCOR1O75376 2440 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 BMP3P12645 472 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 SMPD1P17405 629 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 KCNQ1P51787 676 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 STAT2P52630 851 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 TKFCQ3LXA3 575 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 IQSEC1Q6DN90 963 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 ZNF444Q8N0Y2 327 aaPredicted RBP16.83■□□□□ 0.28
PBX3-212ENST00000538998 GBF1Q92538 1859 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
PBX3-212ENST00000538998 SOWAHBA6NEL2 793 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 SUPT20HL2P0C7V6 817 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 PSMC6P62333 389 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
PBX3-212ENST00000538998 SCLYQ96I15 445 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 ALDH8A1Q9H2A2 487 aaPredicted RBP16.82■□□□□ 0.28
PBX3-212ENST00000538998 COG5Q9UP83 839 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 MCM3APO60318 1980 aa16.82■□□□□ 0.28
PBX3-212ENST00000538998 CA3P07451 260 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 SIRT2Q8IXJ6 389 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 CHURC1Q8WUH1 139 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
PBX3-212ENST00000538998 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
PBX3-212ENST00000538998 XIRP2A4UGR9 3374 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 MYH7P12883 1935 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 ZNF536O15090 1300 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 PRDM1O75626 825 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 MS4A1P11836 297 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 ACTN1P12814 892 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 TDO2P48775 406 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
PBX3-212ENST00000538998 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
PBX3-212ENST00000538998 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 SLC9A7Q96T83 725 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
PBX3-212ENST00000538998 ALAS1P13196 640 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 GNAT2P19087 354 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 RFC2P35250 354 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 SLC1A4P43007 532 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 EEPD1Q7L9B9 569 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 PHOSPHO2Q8TCD6 241 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 STAG1Q8WVM7 1258 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 APPBP2Q92624 585 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 GMCL1Q96IK5 515 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 LRFN3Q9BTN0 628 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 EPB41L4AQ9HCS5 686 aaPredicted RBP16.79■□□□□ 0.28
PBX3-212ENST00000538998 POLR3EQ9NVU0 708 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 CYP39A1Q9NYL5 469 aa16.79■□□□□ 0.28
PBX3-212ENST00000538998 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 TNKSO95271 1327 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 RFXAPO00287 272 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 PLA2G6O60733 806 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 PTGS1P23219 599 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 KIAA1211Q6ZU35 1233 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 DEFB128Q7Z7B8 93 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 MORC4Q8TE76 937 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 TRMT13Q9NUP7 481 aaKnown RBP16.78■□□□□ 0.28
PBX3-212ENST00000538998 DDX19BQ9UMR2 479 aa16.78■□□□□ 0.28
PBX3-212ENST00000538998 CYP2C9P11712 490 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 CPT1AP50416 773 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 PDE4BQ07343 736 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 HLA-CQ95604 372 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 LRRCC1Q9C099 1032 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 EPHX3Q9H6B9 360 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 CERS4Q9HA82 394 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 ZBTB40Q9NUA8 1239 aa16.77■□□□□ 0.28
PBX3-212ENST00000538998 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.28
PBX3-212ENST00000538998 TCF20Q9UGU0 1960 aaKnown RBP16.77■□□□□ 0.27
PBX3-212ENST00000538998 REV3LO60673 3130 aa16.76■□□□□ 0.27
PBX3-212ENST00000538998 TRANK1O15050 2925 aa16.76■□□□□ 0.27
PBX3-212ENST00000538998 EPOPA6NHQ4 379 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms