RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CTAGE5O15320 804 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 ASGR1P07306 291 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 ALAS1P13196 640 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 SNAP25P60880 206 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 NKX3-2P78367 333 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 SMAD3P84022 425 aaKnown RBP14.79□□□□□ -0.04
VAMP1-206ENST00000538970 FPGSQ05932 587 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 TICAM2Q86XR7 235 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 DCAF4Q8WV16 495 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 TBX21Q9UL17 535 aa14.79□□□□□ -0.04
VAMP1-206ENST00000538970 MROH7Q68CQ1 1323 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.78□□□□□ -0.04
VAMP1-206ENST00000538970 ASB14A6NK59 587 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 FGAP02671 866 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 CDK7P50613 346 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 CCDC96Q2M329 555 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 MUM1L1Q5H9M0 696 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
VAMP1-206ENST00000538970 FAM122AQ96E09 287 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 RNPC3Q96LT9 517 aaKnown RBP14.78□□□□□ -0.04
VAMP1-206ENST00000538970 RANBP17Q9H2T7 1088 aaKnown RBP14.78□□□□□ -0.04
VAMP1-206ENST00000538970 CYP39A1Q9NYL5 469 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 CCPG1Q9ULG6 757 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 MTMR7Q9Y216 660 aa14.78□□□□□ -0.04
VAMP1-206ENST00000538970 CCDC171Q6TFL3 1326 aa14.77□□□□□ -0.04
VAMP1-206ENST00000538970 MCM3APO60318 1980 aa14.77□□□□□ -0.04
VAMP1-206ENST00000538970 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 ICAM1P05362 532 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 HSPD1P10809 573 aaKnown RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 TNFAIP2Q03169 654 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 GNASQ5JWF2 1037 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 TMEM47Q9BQJ4 181 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 LNPKQ9C0E8 428 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
VAMP1-206ENST00000538970 GNEQ9Y223 722 aaKnown RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
VAMP1-206ENST00000538970 ARVCFO00192 962 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 TIMP1P01033 207 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
VAMP1-206ENST00000538970 BEX3Q00994 111 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 GRIN2CQ14957 1233 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 TTBK2Q6IQ55 1244 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 BTNL9Q6UXG8 535 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 TLK2Q86UE8 772 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 FAM126BQ8IXS8 530 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
VAMP1-206ENST00000538970 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-206ENST00000538970 LCTP09848 1927 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 TRIM6-TRIM34B2RNG4 842 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 SMPD1P17405 629 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-206ENST00000538970 SLC16A2P36021 539 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 HAND2P61296 217 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 AAMPQ13685 434 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 NSMFQ6X4W1 530 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 FBXO16Q8IX29 292 aaPredicted RBP14.75□□□□□ -0.05
VAMP1-206ENST00000538970 MORC4Q8TE76 937 aa14.75□□□□□ -0.05
VAMP1-206ENST00000538970 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
VAMP1-206ENST00000538970 PDHBP11177 359 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
VAMP1-206ENST00000538970 PTGS1P23219 599 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 TAPT1Q6NXT6 567 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
VAMP1-206ENST00000538970 EEPD1Q7L9B9 569 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 TBC1D10CQ8IV04 446 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 VTI1AQ96AJ9 217 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 VTA1Q9NP79 307 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 GPCPD1Q9NPB8 672 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 PDGFCQ9NRA1 345 aa14.74□□□□□ -0.05
VAMP1-206ENST00000538970 NFIBO00712 420 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 TLR3O15455 904 aaKnown RBP14.73□□□□□ -0.05
VAMP1-206ENST00000538970 CABYRO75952 493 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 CD4P01730 458 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 BAATQ14032 418 aaPredicted RBP14.73□□□□□ -0.05
VAMP1-206ENST00000538970 FSCN1Q16658 493 aaKnown RBP14.73□□□□□ -0.05
VAMP1-206ENST00000538970 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 CXCL17Q6UXB2 119 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 SLC43A3Q8NBI5 491 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.73□□□□□ -0.05
VAMP1-206ENST00000538970 AP5M1Q9H0R1 490 aa14.73□□□□□ -0.05
VAMP1-206ENST00000538970 NEDD4P46934 1319 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 DYNC1LI2O43237 492 aaPredicted RBP14.72□□□□□ -0.05
VAMP1-206ENST00000538970 SNHG28P0DPA3 235 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 CSF2RAP15509 400 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 SDSP20132 328 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
VAMP1-206ENST00000538970 MFAP1P55081 439 aaKnown RBP14.72□□□□□ -0.05
VAMP1-206ENST00000538970 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 PPIGQ13427 754 aaKnown RBP eCLIP14.72□□□□□ -0.058e-7■■■□□ 14.9
VAMP1-206ENST00000538970 TMEM63BQ5T3F8 832 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 IQSEC1Q6DN90 963 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 B4GALNT3Q6L9W6 998 aa14.72□□□□□ -0.05
VAMP1-206ENST00000538970 SLC30A10Q6XR72 485 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms