RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KCNJ14Q9UNX9 436 aa27.07■■□□□ 1.92
TMEM260-202ENST00000538838 PLXNB2O15031 1838 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 TRAF1Q13077 416 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 FAM110CQ1W6H9 321 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 RIOX2Q8IUF8 465 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 GPRC5AQ8NFJ5 357 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 R3HDMLQ9H3Y0 253 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 RNF146Q9NTX7 359 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 PNMA2Q9UL42 364 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 PCNTO95613 3336 aa27.06■■□□□ 1.92
TMEM260-202ENST00000538838 BCRP11274 1271 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 XBP1P17861 261 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 MUM1L1Q5H9M0 696 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 LARP1BQ659C4 914 aaKnown RBP27.05■■□□□ 1.92
TMEM260-202ENST00000538838 CCDC148Q8NFR7 591 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 CWC22Q9HCG8 908 aaKnown RBP27.05■■□□□ 1.92
TMEM260-202ENST00000538838 RNF186Q9NXI6 227 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 OPLAHO14841 1288 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 TRIM29Q14134 588 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 KRT40Q6A162 431 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 C17orf99Q6UX52 265 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 CCDC12Q8WUD4 166 aaPredicted RBP27.05■■□□□ 1.92
TMEM260-202ENST00000538838 TRERF1Q96PN7 1200 aa27.05■■□□□ 1.92
TMEM260-202ENST00000538838 TRPA1O75762 1119 aa27.04■■□□□ 1.92
TMEM260-202ENST00000538838 DNAJC5GQ8N7S2 189 aa27.04■■□□□ 1.92
TMEM260-202ENST00000538838 CLEC4DQ8WXI8 215 aa27.04■■□□□ 1.92
TMEM260-202ENST00000538838 PHF20Q9BVI0 1012 aa27.04■■□□□ 1.92
TMEM260-202ENST00000538838 MRPL11Q9Y3B7 192 aaKnown RBP27.04■■□□□ 1.92
TMEM260-202ENST00000538838 ZSWIM8A7E2V4 1837 aa27.04■■□□□ 1.92
TMEM260-202ENST00000538838 MGAMO43451 1857 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 NFIBO00712 420 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 TBC1D8O95759 1140 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 PDCP20941 246 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 SYT1P21579 422 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 NLRP5P59047 1200 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 TKFCQ3LXA3 575 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 NCAPG2Q86XI2 1143 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 FBXO18Q8NFZ0 1043 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 PORCNQ9H237 461 aa27.03■■□□□ 1.92
TMEM260-202ENST00000538838 SMCO2A6NFE2 343 aa27.02■■□□□ 1.92
TMEM260-202ENST00000538838 ADAMTS3O15072 1205 aa27.02■■□□□ 1.92
TMEM260-202ENST00000538838 ERCC3P19447 782 aa27.02■■□□□ 1.92
TMEM260-202ENST00000538838 ZMYND12Q9H0C1 365 aa27.02■■□□□ 1.92
TMEM260-202ENST00000538838 LCTP09848 1927 aa27.02■■□□□ 1.92
TMEM260-202ENST00000538838 ESYT2A0FGR8 921 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 SLC25A27O95847 323 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 ADCY7P51828 1080 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 CCNA1P78396 465 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 NPY5RQ15761 445 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 CFHR5Q9BXR6 569 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 ACAD9Q9H845 621 aa27.01■■□□□ 1.92
TMEM260-202ENST00000538838 VPS37CA5D8V6 355 aaPredicted RBP27.01■■□□□ 1.91
TMEM260-202ENST00000538838 H3BQV1 296 aa27.01■■□□□ 1.91
TMEM260-202ENST00000538838 MMP1P03956 469 aa27.01■■□□□ 1.91
TMEM260-202ENST00000538838 IFFO2Q5TF58 517 aa27.01■■□□□ 1.91
TMEM260-202ENST00000538838 FAM177A1Q8N128 213 aaPredicted RBP27.01■■□□□ 1.91
TMEM260-202ENST00000538838 EFCC1Q9HA90 598 aa27.01■■□□□ 1.91
TMEM260-202ENST00000538838 COPB2P35606 906 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 DDIT3P35638 169 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 WDR78Q5VTH9 848 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 SHCBP1Q8NEM2 672 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 CHST13Q8NET6 341 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 TBC1D5Q92609 795 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 PSTPIP2Q9H939 334 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 C6orf50Q9HD87 102 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 RIC8AQ9NPQ8 531 aa27■■□□□ 1.91
TMEM260-202ENST00000538838 CALML3P27482 149 aa26.99■■□□□ 1.91
TMEM260-202ENST00000538838 PKP1Q13835 747 aa26.99■■□□□ 1.91
TMEM260-202ENST00000538838 UBE2SQ16763 222 aa26.99■■□□□ 1.91
TMEM260-202ENST00000538838 CUL5Q93034 780 aa26.99■■□□□ 1.91
TMEM260-202ENST00000538838 ZNFX1Q9P2E3 1918 aaKnown RBP26.99■■□□□ 1.91
TMEM260-202ENST00000538838 STX6O43752 255 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 ECM2O94769 699 aaPredicted RBP26.98■■□□□ 1.91
TMEM260-202ENST00000538838 CFBP00751 764 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 MAP2K1Q02750 393 aaPredicted RBP26.98■■□□□ 1.91
TMEM260-202ENST00000538838 MROH8Q9H579 483 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 PCDHA4Q9UN74 947 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 GNA11P29992 359 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 USP17L6PQ6QN14 398 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 NSMFQ6X4W1 530 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 DIS3L2Q8IYB7 885 aaKnown RBP26.98■■□□□ 1.91
TMEM260-202ENST00000538838 BLIDQ8IZY5 108 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 DAGLBQ8NCG7 672 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 OXER1Q8TDS5 423 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 FBXO40Q9UH90 709 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 MTMR6Q9Y217 621 aa26.98■■□□□ 1.91
TMEM260-202ENST00000538838 MEIS2O14770 477 aa26.97■■□□□ 1.91
TMEM260-202ENST00000538838 HOXA13P31271 388 aaPredicted RBP26.97■■□□□ 1.91
TMEM260-202ENST00000538838 KRT2P35908 639 aa26.97■■□□□ 1.91
TMEM260-202ENST00000538838 SLC30A10Q6XR72 485 aa26.97■■□□□ 1.91
TMEM260-202ENST00000538838 CCAR1Q8IX12 1150 aaKnown RBP26.97■■□□□ 1.91
TMEM260-202ENST00000538838 RASGRP4Q8TDF6 673 aa26.97■■□□□ 1.91
TMEM260-202ENST00000538838 A1CFQ9NQ94 594 aaKnown RBP26.97■■□□□ 1.91
TMEM260-202ENST00000538838 SAGE1Q9NXZ1 904 aa26.97■■□□□ 1.91
TMEM260-202ENST00000538838 MRPL12P52815 198 aaKnown RBP26.96■■□□□ 1.91
TMEM260-202ENST00000538838 GALNT17Q6IS24 598 aa26.96■■□□□ 1.91
TMEM260-202ENST00000538838 MCF2L2Q86YR7 1114 aa26.96■■□□□ 1.91
TMEM260-202ENST00000538838 TMEM260Q9NX78 707 aa26.96■■□□□ 1.91
TMEM260-202ENST00000538838 ZNF236Q9UL36 1845 aa26.96■■□□□ 1.91
TMEM260-202ENST00000538838 MYH15Q9Y2K3 1946 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms