RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SMARCA1P28370 1054 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 DOK7Q18PE1 504 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 EEF2KMTQ96G04 330 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 GPCPD1Q9NPB8 672 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 PES1O00541 588 aaKnown RBP27.99■■■□□ 2.07
RAB40C-204ENST00000538492 GIMAP8Q8ND71 665 aaPredicted RBP27.99■■■□□ 2.07
RAB40C-204ENST00000538492 TRIM47Q96LD4 638 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 COA1Q9GZY4 146 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 ABHD10Q9NUJ1 306 aa27.99■■■□□ 2.07
RAB40C-204ENST00000538492 MYL1P05976 194 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 GABPAQ06546 454 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 ZC3H12CQ9C0D7 883 aaKnown RBP27.98■■■□□ 2.07
RAB40C-204ENST00000538492 ATP6V0A2Q9Y487 856 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 TXKP42681 527 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 MAP3K9P80192 1104 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 STIM1Q13586 685 aa27.98■■■□□ 2.07
RAB40C-204ENST00000538492 LRRC37AA6NMS7 1700 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 PSMA7O14818 248 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 TADA3O75528 432 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 H2AFXP16104 143 aaPredicted RBP27.97■■■□□ 2.07
RAB40C-204ENST00000538492 CCDC51Q96ER9 411 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 ERVK-24P63145 666 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 ACRBPQ8NEB7 543 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 TRIM9Q9C026 710 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 USP40Q9NVE5 1235 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 ZNF446Q9NWS9 450 aa27.97■■■□□ 2.07
RAB40C-204ENST00000538492 ZMYND15Q9H091 742 aa27.96■■■□□ 2.07
RAB40C-204ENST00000538492 PDE4DQ08499 809 aa27.96■■■□□ 2.07
RAB40C-204ENST00000538492 MMTAG2Q9BU76 263 aaKnown RBP27.96■■■□□ 2.07
RAB40C-204ENST00000538492 QTRT2Q9H974 415 aaKnown RBP27.96■■■□□ 2.07
RAB40C-204ENST00000538492 MRFAP1Q9Y605 127 aa27.96■■■□□ 2.07
RAB40C-204ENST00000538492 SLURP2P0DP57 97 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 KRT9P35527 623 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 ASIC1P78348 528 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 PROM2Q8N271 834 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 CUEDC2Q9H467 287 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 SERPINB13Q9UIV8 391 aa27.95■■■□□ 2.07
RAB40C-204ENST00000538492 PLIN4Q96Q06 1357 aa27.95■■■□□ 2.06
RAB40C-204ENST00000538492 ASPRV1Q53RT3 343 aa27.95■■■□□ 2.06
RAB40C-204ENST00000538492 ESYT2A0FGR8 921 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 EFCAB8A8MWE9 144 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 TMC4Q7Z404 712 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 EPC1Q9H2F5 836 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 FCER1AP12319 257 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 CLCN6P51797 869 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 ADCY7P51828 1080 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 STK4Q13043 487 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 TTI2Q6NXR4 508 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 TMTC1Q8IUR5 882 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 EXOC1Q9NV70 894 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 ANKRD31Q8N7Z5 1873 aa27.94■■■□□ 2.06
RAB40C-204ENST00000538492 FECHP22830 423 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 HSPA1LP34931 641 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 ATP2B2Q01814 1243 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 PPP2R3AQ06190 1150 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 MAGEF1Q9HAY2 307 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 ADAMTSL1Q8N6G6 1762 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 IGKV6D-41A0A0C4DH26 115 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 SLC37A4O43826 429 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 TDP2O95551 362 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 TTLL1O95922 423 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 ZSCAN20P17040 1043 aaPredicted RBP27.93■■■□□ 2.06
RAB40C-204ENST00000538492 TRIM14Q14142 442 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 CALCRLQ16602 461 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 MB21D1Q8N884 522 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 HPS3Q969F9 1004 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 THAP9Q9H5L6 903 aa27.93■■■□□ 2.06
RAB40C-204ENST00000538492 KIF5CO60282 957 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 ABL1P00519 1130 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 SRGNP10124 158 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 EEF1GP26641 437 aaKnown RBP27.92■■■□□ 2.06
RAB40C-204ENST00000538492 TTBK2Q6IQ55 1244 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 CSGALNACT2Q8N6G5 542 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 MAGEC2Q9UBF1 373 aaPredicted RBP27.92■■■□□ 2.06
RAB40C-204ENST00000538492 MPHOSPH10O00566 681 aaKnown RBP27.92■■■□□ 2.06
RAB40C-204ENST00000538492 SNHG28P0DPA3 235 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 CYP26C1Q6V0L0 522 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 CALML4Q96GE6 196 aa27.92■■■□□ 2.06
RAB40C-204ENST00000538492 DUSP9Q99956 384 aaKnown RBP27.92■■■□□ 2.06
RAB40C-204ENST00000538492 LGALS16A8MUM7 142 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 ADGRF4Q8IZF3 695 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 C7orf25Q9BPX7 421 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 LRWD1Q9UFC0 647 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 TTC26A0AVF1 554 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 SHMT1P34896 483 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 SLC16A2P36021 539 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 ZNF569Q5MCW4 686 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 CDC42EP5Q6NZY7 148 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 KRT27Q7Z3Y8 459 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 CCDC47Q96A33 483 aaKnown RBP27.91■■■□□ 2.06
RAB40C-204ENST00000538492 DHTKD1Q96HY7 919 aaPredicted RBP27.91■■■□□ 2.06
RAB40C-204ENST00000538492 MTMR9Q96QG7 549 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 JMJD4Q9H9V9 463 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 SUGT1Q9Y2Z0 365 aa27.91■■■□□ 2.06
RAB40C-204ENST00000538492 G3V3G9 751 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 hCG_1984214I3L0E3 225 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 EDIL3O43854 480 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 TNNI2P48788 182 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 UBE2SQ16763 222 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 DCAF8Q5TAQ9 597 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms