RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CABYRO75952 493 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 ASGR1P07306 291 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 CNTN2Q02246 1040 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 FPGSQ05932 587 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 SHHQ15465 462 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 RRP12Q5JTH9 1297 aaKnown RBP10.19□□□□□ -0.78
DDB1-212ENST00000538470 C9orf50Q5SZB4 431 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 SYDE2Q5VT97 1194 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 CCDC174Q6PII3 467 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 SLC17A8Q8NDX2 589 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 SEZ6LQ9BYH1 1024 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 VTA1Q9NP79 307 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 TMEM39AQ9NV64 488 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 TBX21Q9UL17 535 aa10.19□□□□□ -0.78
DDB1-212ENST00000538470 LAMA2P24043 3122 aaKnown RBP10.18□□□□□ -0.78
DDB1-212ENST00000538470 ASTN1O14525 1302 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 HIP1O00291 1037 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
DDB1-212ENST00000538470 PDHBP11177 359 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 FAAP100Q0VG06 881 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 MFSD6Q6ZSS7 791 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 RASGRP2Q7LDG7 609 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TLK2Q86UE8 772 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 CHD1LQ86WJ1 897 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 RNPC3Q96LT9 517 aaKnown RBP10.18□□□□□ -0.78
DDB1-212ENST00000538470 TTC14Q96N46 770 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TMEM47Q9BQJ4 181 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 INCENPQ9NQS7 918 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 ADD3Q9UEY8 706 aaKnown RBP10.18□□□□□ -0.78
DDB1-212ENST00000538470 Q9Y3F1 56 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 TANC1Q9C0D5 1861 aa10.18□□□□□ -0.78
DDB1-212ENST00000538470 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 ARVCFO00192 962 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 CTAGE5O15320 804 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 ZEB2O60315 1214 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 TIMP1P01033 207 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 SDSP20132 328 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 ITGB8P26012 769 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 CDK7P50613 346 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 ZNF543Q08ER8 600 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 PPIGQ13427 754 aaKnown RBP eCLIP10.17□□□□□ -0.787e-11■□□□□ 9
DDB1-212ENST00000538470 CCDC178Q5BJE1 867 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
DDB1-212ENST00000538470 IQSEC1Q6DN90 963 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 NSMFQ6X4W1 530 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 TBC1D10CQ8IV04 446 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 ESR2Q92731 530 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 GUCD1Q96NT3 240 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 MPHOSPH6Q99547 160 aaKnown RBP10.17□□□□□ -0.78
DDB1-212ENST00000538470 MAF1Q9H063 256 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 MTMR7Q9Y216 660 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
DDB1-212ENST00000538470 KIAA1217Q5T5P2 1943 aa10.17□□□□□ -0.78
DDB1-212ENST00000538470 NEDD4P46934 1319 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 ALDH5A1P51649 535 aaPredicted RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 SNAP25P60880 206 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 HAND2P61296 217 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 NUCB1Q02818 461 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 FSCN1Q16658 493 aaKnown RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 MFSD5Q6N075 450 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 PSRC1Q6PGN9 363 aaPredicted RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 PLEKHM2Q8IWE5 1019 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 FBXO16Q8IX29 292 aaPredicted RBP10.16□□□□□ -0.78
DDB1-212ENST00000538470 SLC43A3Q8NBI5 491 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 GBF1Q92538 1859 aa10.16□□□□□ -0.78
DDB1-212ENST00000538470 NFIBO00712 420 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 ZNF213O14771 459 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 CD4P01730 458 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 SMPD1P17405 629 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 SLC16A2P36021 539 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 EPHB4P54760 987 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
DDB1-212ENST00000538470 BEX3Q00994 111 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
DDB1-212ENST00000538470 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 B4GALNT3Q6L9W6 998 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 TAPT1Q6NXT6 567 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 DGKHQ86XP1 1220 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 TMEM199Q8N511 208 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 DNERQ8NFT8 737 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 DSCC1Q9BVC3 393 aa10.15□□□□□ -0.78
DDB1-212ENST00000538470 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms