RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RAVER2Q9HCJ3 691 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PCDHA4Q9UN74 947 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 KCNH4Q9UQ05 1017 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 CEP350Q5VT06 3117 aa12.22□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PASKQ96RG2 1323 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MANSC4A6NHS7 340 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BTBD18B2RXH4 712 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 TREML2Q5T2D2 321 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 ATG4CQ96DT6 458 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 PAGR1Q9BTK6 254 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 RANBP17Q9H2T7 1088 aaKnown RBP12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 FOXP1Q9H334 677 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 EHMT1Q9H9B1 1298 aa12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-211ENST00000538363 VWA5AO00534 786 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MARCH6O60337 910 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CFBP00751 764 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ICAM1P05362 532 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PTMSP20962 102 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 WDR78Q5VTH9 848 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 JAKMIP3Q5VZ66 844 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MCTP2Q6DN12 878 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 KRT25Q7Z3Z0 450 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 REXO1Q8N1G1 1221 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MYPNQ86TC9 1320 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GCOM1H8Y6P7 765 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PDHXO00330 501 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 STAT3P40763 770 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RESTQ13127 1097 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 STK38Q15208 465 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NONOQ15233 471 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SLC35G1Q2M3R5 365 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SNRNP48Q6IEG0 339 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GTF3C2Q8WUA4 911 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ZMYND12Q9H0C1 365 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ASCC2Q9H1I8 757 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SLC38A10Q9HBR0 1119 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CEP131Q9UPN4 1083 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ESYT2A0FGR8 921 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 FIBPO43427 364 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GJA5P36382 358 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ZNF76P36508 570 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 OAZ1P54368 228 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 INHBEP58166 350 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 DNM1Q05193 864 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SREBF2Q12772 1141 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NR5A1Q13285 461 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TKFCQ3LXA3 575 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NSMFQ6X4W1 530 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 FCHSD1Q86WN1 690 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PARK7Q99497 189 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 SCAND2PQ9GZW5 306 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1A-211ENST00000538363 DDX11L8A8MPP1 907 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 GABBR2O75899 941 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 HERVK_113P62684 666 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 CCNA1P78396 465 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 HTRA3P83110 453 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 UBE2SQ16763 222 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 NCAPG2Q86XI2 1143 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 RASGRP4Q8TDF6 673 aa12.17□□□□□ -0.46
TNFRSF1A-211ENST00000538363 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms